RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 UQCR10Q9UDW1 63 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 A0A087WWL8 130 aa6□□□□□ -1.45
CHD4-208ENST00000540960 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
CHD4-208ENST00000540960 SDHAF1A6NFY7 115 aa6□□□□□ -1.45
CHD4-208ENST00000540960 A8MZ25 164 aa6□□□□□ -1.45
CHD4-208ENST00000540960 IGHV3-53P01767 116 aa6□□□□□ -1.45
CHD4-208ENST00000540960 PLNP26678 52 aa6□□□□□ -1.45
CHD4-208ENST00000540960 POLR2KP53803 58 aaKnown RBP6□□□□□ -1.45
CHD4-208ENST00000540960 SPATA45Q537H7 98 aa6□□□□□ -1.45
CHD4-208ENST00000540960 CEMP1Q6PRD7 247 aaPredicted RBP6□□□□□ -1.45
CHD4-208ENST00000540960 ERASQ7Z444 233 aa6□□□□□ -1.45
CHD4-208ENST00000540960 C1orf158Q8N1D5 194 aa6□□□□□ -1.45
CHD4-208ENST00000540960 ZNF664Q8N3J9 261 aa6□□□□□ -1.45
CHD4-208ENST00000540960 C11orf72Q8NBR9 251 aa6□□□□□ -1.45
CHD4-208ENST00000540960 OR4C5Q8NGB2 326 aa6□□□□□ -1.45
CHD4-208ENST00000540960 TOMM6Q96B49 74 aa6□□□□□ -1.45
CHD4-208ENST00000540960 SCGB3A1Q96QR1 104 aa6□□□□□ -1.45
CHD4-208ENST00000540960 OVOL2Q9BRP0 275 aa6□□□□□ -1.45
CHD4-208ENST00000540960 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
CHD4-208ENST00000540960 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
CHD4-208ENST00000540960 TRAV26-2A0A0B4J265 109 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 TRAV4A0A0B4J268 109 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 TEX48A0A1B0GUV7 120 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 CDK2AP2O75956 126 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 RBMY1CP0DJD4 496 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 AZU1P20160 251 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 CRYBA4P53673 196 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 TMEM97Q5BJF2 176 aa5.99□□□□□ -1.45
CHD4-208ENST00000540960 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
CHD4-208ENST00000540960 IGHV3OR16-12A0A075B7B8 117 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 TRGV1A0A0A0MS02 117 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 RTL8CO15255 209 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 DPM2O94777 84 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 GATA1P15976 413 aaPredicted RBP5.98□□□□□ -1.45
CHD4-208ENST00000540960 RPL35AP18077 110 aaKnown RBP5.98□□□□□ -1.45
CHD4-208ENST00000540960 RPL36AP83881 106 aaKnown RBP5.98□□□□□ -1.45
CHD4-208ENST00000540960 ZNF124Q15973 351 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 CFAP126Q5VTH2 177 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 Q8N976 141 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
CHD4-208ENST00000540960 C18orf15Q96N68 181 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 TIMM17AQ99595 171 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 PAM16Q9Y3D7 125 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
CHD4-208ENST00000540960 TRGV2A0A075B6R0 118 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 A0A087WX48 190 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 A0A096LNJ9 63 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 INAFM2P0DMQ5 153 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 C2orf66Q6UXQ4 117 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 DAZ4Q86SG3 579 aaKnown RBP5.97□□□□□ -1.45
CHD4-208ENST00000540960 CSNK1G2-AS1Q8NCQ2 148 aa5.97□□□□□ -1.45
CHD4-208ENST00000540960 RPL39LQ96EH5 51 aaKnown RBP5.97□□□□□ -1.45
CHD4-208ENST00000540960 DAZ3Q9NR90 486 aaKnown RBP5.97□□□□□ -1.45
CHD4-208ENST00000540960 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 LYRM9A8MSI8 78 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 SPRY2O43597 315 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 IGKCP01834 107 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 HERVK_113P61574 105 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 COTL1Q14019 142 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 UFSP1Q6NVU6 142 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 MRPS16Q9Y3D3 137 aaKnown RBP5.96□□□□□ -1.46
CHD4-208ENST00000540960 PYGO1Q9Y3Y4 419 aa5.96□□□□□ -1.46
CHD4-208ENST00000540960 TRBV7-3A0A075B6L6 115 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 F8VRH5 84 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 H0Y8G0 127 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 DLEU1O43261 78 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 IGLC3P0DOY3 106 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 MIFP14174 115 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 HNRNPA3P51991 378 aaKnown RBP5.95□□□□□ -1.46
CHD4-208ENST00000540960 PMVKQ15126 192 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 JPT2Q9H910 190 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 SPANXA1Q9NS26 97 aa5.95□□□□□ -1.46
CHD4-208ENST00000540960 MRPL16Q9NX20 251 aaKnown RBP5.95□□□□□ -1.46
CHD4-208ENST00000540960 TRGV4A0A0C4DH28 118 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 H7C423 109 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 K7EQD1 137 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 M0R143 59 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 SIVA1O15304 175 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 GAS8-AS1O95177 125 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 GIG44P09565 113 aaPredicted RBP5.94□□□□□ -1.46
CHD4-208ENST00000540960 ODF1Q14990 250 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 BOD1L2Q8IYS8 172 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 C20orf203Q8NBC4 194 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 TIMM21Q9BVV7 248 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
CHD4-208ENST00000540960 TP53TG1Q9Y2A0 90 aa5.94□□□□□ -1.46
CHD4-208ENST00000540960 CHTOPQ9Y3Y2 248 aaKnown RBP5.94□□□□□ -1.46
CHD4-208ENST00000540960 SEC11AP67812 179 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 CDPF1Q6NVV7 123 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 LINC00173Q6ZV60 143 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 SH2D6Q7Z4S9 175 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 NEXN-AS1Q8NBZ9 246 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 C2orf88Q9BSF0 95 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms