RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PEA15	Q15121	130 aa		13.08	□□□□□ -0.32
RAP1B-222	ENST00000540781	RPL39L	Q96EH5	51 aa	Known RBP	13.08	□□□□□ -0.32
RAP1B-222	ENST00000540781		A0A1B0GUT8	65 aa		13.07	□□□□□ -0.32
RAP1B-222	ENST00000540781	FAM231B	A6NCW3	169 aa		13.07	□□□□□ -0.32
RAP1B-222	ENST00000540781	EPM2A	B3EWF7	344 aa		13.07	□□□□□ -0.32
RAP1B-222	ENST00000540781		C9JQL5	133 aa		13.07	□□□□□ -0.32
RAP1B-222	ENST00000540781	ISOC2	Q96AB3	205 aa		13.07	□□□□□ -0.32
RAP1B-222	ENST00000540781	UBE2L6	O14933	153 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	HLA-DQA1	P01909	254 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	RPL23	P62829	140 aa	Known RBP	13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	HAMP	P81172	84 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	SRSF3	P84103	164 aa	Known RBP	13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	C14orf177	Q52M58	125 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	FAM30A	Q9NZY2	134 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781	NAT8	Q9UHE5	227 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781		V9GYV3	84 aa		13.06	□□□□□ -0.32
RAP1B-222	ENST00000540781		A0A1B0GUV1	79 aa		13.05	□□□□□ -0.32
RAP1B-222	ENST00000540781	REG3A	Q06141	175 aa		13.05	□□□□□ -0.32
RAP1B-222	ENST00000540781	ADIRF	Q15847	76 aa		13.05	□□□□□ -0.32
RAP1B-222	ENST00000540781	C20orf203	Q8NBC4	194 aa		13.05	□□□□□ -0.32
RAP1B-222	ENST00000540781	IGLV4-60	A0A075B6I1	120 aa		13.04	□□□□□ -0.32
RAP1B-222	ENST00000540781	SMR3B	P02814	79 aa	Predicted RBP	13.04	□□□□□ -0.32
RAP1B-222	ENST00000540781	TMEM191A	Q9H0A3	160 aa		13.04	□□□□□ -0.32
RAP1B-222	ENST00000540781	SMDT1	Q9H4I9	107 aa		13.04	□□□□□ -0.32
RAP1B-222	ENST00000540781	SDHAF1	A6NFY7	115 aa		13.03	□□□□□ -0.32
RAP1B-222	ENST00000540781	LINC01620	Q4KN68	170 aa		13.03	□□□□□ -0.32
RAP1B-222	ENST00000540781	USP17L23	D6RBM5	183 aa		13.02	□□□□□ -0.33
RAP1B-222	ENST00000540781	NCR2	O95944	276 aa		13.02	□□□□□ -0.33
RAP1B-222	ENST00000540781	RIG	Q13278	110 aa		13.02	□□□□□ -0.33
RAP1B-222	ENST00000540781	KRTAP26-1	Q6PEX3	210 aa		13.02	□□□□□ -0.33
RAP1B-222	ENST00000540781	NUP35	Q8NFH5	326 aa		13.02	□□□□□ -0.33
RAP1B-222	ENST00000540781	DNAH8	Q96JB1	4490 aa		13.01	□□□□□ -0.33
RAP1B-222	ENST00000540781	IGLV10-54	A0A075B6I4	117 aa		13.01	□□□□□ -0.33
RAP1B-222	ENST00000540781		Q5VSD8	79 aa		13.01	□□□□□ -0.33
RAP1B-222	ENST00000540781	TRAV8-4	A0A0B4J246	113 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	TRBV6-5	A0A0K0K1A5	114 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	GAS8-AS1	O95177	125 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	APCS	P02743	223 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	RAB4A	P20338	218 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	PMCH	P20382	165 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	RNF185	Q96GF1	192 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781	NAT8B	Q9UHF3	227 aa		13	□□□□□ -0.33
RAP1B-222	ENST00000540781		I3L3M4	83 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781		Q6ZSA8	131 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781	AMN1	Q8IY45	258 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781	MRAP2	Q96G30	205 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781	ST20	Q9HBF5	79 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781	FAT1	Q14517	4588 aa		12.99	□□□□□ -0.33
RAP1B-222	ENST00000540781	AMMECR1L	Q6DCA0	310 aa		12.98	□□□□□ -0.33
RAP1B-222	ENST00000540781	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	12.97	□□□□□ -0.33
RAP1B-222	ENST00000540781	IGKV2-29	A2NJV5	120 aa	Predicted RBP	12.97	□□□□□ -0.33
RAP1B-222	ENST00000540781	FAM229A	H3BQW9	127 aa		12.97	□□□□□ -0.33
RAP1B-222	ENST00000540781	SMIM27	A0A1W2PRY6	76 aa		12.96	□□□□□ -0.33
RAP1B-222	ENST00000540781		H7C423	109 aa		12.96	□□□□□ -0.33
RAP1B-222	ENST00000540781	PRSS1	P07477	247 aa		12.96	□□□□□ -0.33
RAP1B-222	ENST00000540781	RPS10	P46783	165 aa	Known RBP	12.96	□□□□□ -0.33
RAP1B-222	ENST00000540781	RNASEK	Q6P5S7	137 aa	Known RBP	12.96	□□□□□ -0.33
RAP1B-222	ENST00000540781	IGKV3OR2-268	A0A0C4DH90	116 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	SMKR1	H3BMG3	65 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	TSHB	P01222	138 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	INAFM2	P0DMQ5	153 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	FGF6	P10767	208 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	POLR2K	P53803	58 aa	Known RBP	12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	TMEM242	Q9NWH2	141 aa		12.94	□□□□□ -0.34
RAP1B-222	ENST00000540781	CAMP	P49913	170 aa		12.93	□□□□□ -0.34
RAP1B-222	ENST00000540781	RAB14	P61106	215 aa		12.93	□□□□□ -0.34
RAP1B-222	ENST00000540781	DGAT2L7P	Q6IED9	249 aa		12.93	□□□□□ -0.34
RAP1B-222	ENST00000540781	CLRN3	Q8NCR9	226 aa		12.93	□□□□□ -0.34
RAP1B-222	ENST00000540781	TRBV27	A0A0K0K1C4	114 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781		A0A1B0GW15	77 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	PPP1R17	O96001	155 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	ESD	P10768	282 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	FAM104B	Q5XKR9	115 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	SCX	Q7RTU7	201 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	BTF3L4	Q96K17	158 aa		12.91	□□□□□ -0.34
RAP1B-222	ENST00000540781	GAGE12H	A6NDE8	117 aa		12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	VCY	O14598	125 aa		12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	ZNF25	P17030	456 aa	Predicted RBP	12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	MRPL51	Q4U2R6	128 aa	Known RBP	12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	TMEM101	Q96IK0	257 aa		12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	CHAC1	Q9BUX1	264 aa		12.9	□□□□□ -0.34
RAP1B-222	ENST00000540781	hDV102S1	A0JD36	115 aa		12.89	□□□□□ -0.35
RAP1B-222	ENST00000540781	NRAC	Q8N912	160 aa		12.89	□□□□□ -0.35
RAP1B-222	ENST00000540781	C9orf163	Q8N9P6	203 aa		12.89	□□□□□ -0.35
RAP1B-222	ENST00000540781	S100A8	P05109	93 aa		12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	SUMO2	P61956	95 aa	Known RBP	12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	MRPL54	Q6P161	138 aa	Known RBP	12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	OR5A1	Q8NGJ0	315 aa		12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	VPS13B	Q7Z7G8	4022 aa		12.88	□□□□□ -0.35
RAP1B-222	ENST00000540781	C7orf77	A4D0Y5	90 aa		12.87	□□□□□ -0.35
RAP1B-222	ENST00000540781	FCER1G	P30273	86 aa		12.87	□□□□□ -0.35
RAP1B-222	ENST00000540781	LINC00528	Q8N1L1	170 aa		12.87	□□□□□ -0.35
RAP1B-222	ENST00000540781	AP5S1	Q9NUS5	200 aa		12.87	□□□□□ -0.35
RAP1B-222	ENST00000540781	SRRM2	Q9UQ35	2752 aa	Known RBP	12.87	□□□□□ -0.35
RAP1B-222	ENST00000540781	LINC00862	A6NCI5	91 aa		12.86	□□□□□ -0.35
RAP1B-222	ENST00000540781	PPP1R2P9	O14990	202 aa		12.86	□□□□□ -0.35
RAP1B-222	ENST00000540781	CKS2	P33552	79 aa		12.86	□□□□□ -0.35
RAP1B-222	ENST00000540781	HBB	P68871	147 aa		12.86	□□□□□ -0.35
RAP1B-222	ENST00000540781	CFAP161	Q6P656	301 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms