RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 GAGE1Q13065 139 aa6.8□□□□□ -1.32
PAAF1-209ENST00000540659 GAGE4Q13068 117 aa6.8□□□□□ -1.32
PAAF1-209ENST00000540659 GAGE5Q13069 117 aa6.8□□□□□ -1.32
PAAF1-209ENST00000540659 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
PAAF1-209ENST00000540659 KPRPQ5T749 579 aaPredicted RBP6.8□□□□□ -1.32
PAAF1-209ENST00000540659 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
PAAF1-209ENST00000540659 IGHV4-28A0A0C4DH34 117 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 LYRM9A8MSI8 78 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 DDTP30046 118 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 RHOHQ15669 191 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 SLC25A29Q8N8R3 303 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 BAALCQ8WXS3 180 aa6.79□□□□□ -1.32
PAAF1-209ENST00000540659 PRB2P02812 416 aaPredicted RBP6.78□□□□□ -1.32
PAAF1-209ENST00000540659 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
PAAF1-209ENST00000540659 ODF1Q14990 250 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 ZC2HC1BQ5TFG8 222 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 ERASQ7Z444 233 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
PAAF1-209ENST00000540659 RNF183Q96D59 192 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 C14orf144Q96I85 54 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 RETNQ9HD89 108 aa6.78□□□□□ -1.32
PAAF1-209ENST00000540659 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
PAAF1-209ENST00000540659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
PAAF1-209ENST00000540659 A0A087WX48 190 aa6.77□□□□□ -1.33
PAAF1-209ENST00000540659 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
PAAF1-209ENST00000540659 IGKCP01834 107 aa6.77□□□□□ -1.33
PAAF1-209ENST00000540659 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
PAAF1-209ENST00000540659 COTL1Q14019 142 aa6.77□□□□□ -1.33
PAAF1-209ENST00000540659 FHL2Q14192 279 aa6.77□□□□□ -1.33
PAAF1-209ENST00000540659 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
PAAF1-209ENST00000540659 TRBV7-3A0A075B6L6 115 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 TRBV10-1A0A0K0K1A3 114 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 DPM2O94777 84 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 STPG4Q8N801 248 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 OPRPNQ99935 248 aaPredicted RBP6.76□□□□□ -1.33
PAAF1-209ENST00000540659 MIEN1Q9BRT3 115 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 CHCHD7Q9BUK0 85 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
PAAF1-209ENST00000540659 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 IGIPA6NJ69 53 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 DAD1P61803 113 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 CEMP1Q6PRD7 247 aaPredicted RBP6.75□□□□□ -1.33
PAAF1-209ENST00000540659 LINC00612Q8N6U2 182 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 Q8NAQ8 132 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 TIMM17AQ99595 171 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 SPATA25Q9BR10 227 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 PRADC1Q9BSG0 188 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 ZMAT4Q9H898 229 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 UQCR10Q9UDW1 63 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 TGP01266 2768 aa6.75□□□□□ -1.33
PAAF1-209ENST00000540659 PRSS29PA6NIE9 313 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 F8VRH5 84 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 UBE2D3P61077 147 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 UBE2D2P62837 147 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 PMVKQ15126 192 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 DAZ4Q86SG3 579 aaKnown RBP6.74□□□□□ -1.33
PAAF1-209ENST00000540659 DAZ3Q9NR90 486 aaKnown RBP6.74□□□□□ -1.33
PAAF1-209ENST00000540659 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
PAAF1-209ENST00000540659 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
PAAF1-209ENST00000540659 HTN3P15516 51 aa6.73□□□□□ -1.33
PAAF1-209ENST00000540659 NMUP48645 174 aa6.73□□□□□ -1.33
PAAF1-209ENST00000540659 HNRNPA3P51991 378 aaKnown RBP6.73□□□□□ -1.33
PAAF1-209ENST00000540659 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
PAAF1-209ENST00000540659 DEFB121Q5J5C9 76 aa6.73□□□□□ -1.33
PAAF1-209ENST00000540659 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
PAAF1-209ENST00000540659 A0A096LPF7 62 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 A0A0J9YY99 117 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 K7EIL1 84 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 GYPEP15421 78 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 PLNP26678 52 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 CRYBA4P53673 196 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 NTM-AS1Q6ZSK4 140 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 MRAPQ8TCY5 172 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 UBE2D4Q9Y2X8 147 aa6.72□□□□□ -1.33
PAAF1-209ENST00000540659 UBE2L6O14933 153 aa6.71□□□□□ -1.34
PAAF1-209ENST00000540659 CTAG1AP78358 180 aa6.71□□□□□ -1.34
PAAF1-209ENST00000540659 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
PAAF1-209ENST00000540659 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
PAAF1-209ENST00000540659 VCX2Q9H322 139 aa6.71□□□□□ -1.34
PAAF1-209ENST00000540659 C11orf68Q9H3H3 251 aaKnown RBP6.71□□□□□ -1.34
PAAF1-209ENST00000540659 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 F5H768 121 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 PAX4O43316 350 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 ATP5G1P05496 136 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 NHLRC4P0CG21 123 aaPredicted RBP6.7□□□□□ -1.34
PAAF1-209ENST00000540659 LINC00694P0DN24 101 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 COX8AP10176 69 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms