RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 FAM103A1Q9BTL3 118 aaKnown RBP5.04□□□□□ -1.6
PTPRB-203ENST00000538174 AGPAT4-IT1Q9H0P7 198 aa5.04□□□□□ -1.6
PTPRB-203ENST00000538174 ESM1Q9NQ30 184 aa5.04□□□□□ -1.6
PTPRB-203ENST00000538174 IGHV1-69DA0A0B4J2H0 117 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 IGHV1-69P01742 117 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
PTPRB-203ENST00000538174 MRPL51Q4U2R6 128 aaKnown RBP5.03□□□□□ -1.6
PTPRB-203ENST00000538174 PIK3CD-AS1Q5SR53 167 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 FAM19A2Q8N3H0 131 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 IGLV2-18A0A075B6J9 118 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 A8MWV9 139 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 ASIPP42127 132 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 TNP2Q05952 138 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 MORN3Q6PF18 240 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-203ENST00000538174 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 RNF185Q96GF1 192 aa5.03□□□□□ -1.6
PTPRB-203ENST00000538174 A0A096LNJ9 63 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV2A0A0B4J234 112 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 A6NDX4 124 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 SOCS3O14543 225 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 SPINK4O60575 86 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 DYNAPQ8N1N2 210 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 AKAP6Q13023 2319 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 LYNX1G3V0Z9 82 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 LYNX1P0DP58 116 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 C15orf32Q32M92 178 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 PRO0461Q9UI25 63 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 HILPDAQ9Y5L2 63 aa5.02□□□□□ -1.61
PTPRB-203ENST00000538174 IGHV4OR15-8A0A075B7B6 117 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 A0A087WW49 117 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV8-1A0A0A6YYK1 113 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV8-2A0A0B4J237 113 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV41A0A0B4J266 112 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 H3BMG7 143 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 ZNF688P0C7X2 276 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 CFHR3Q02985 330 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 Q6ZQT7 251 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 PPDPFLQ8WWR9 84 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 B9D2Q9BPU9 175 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 HHLA3Q9XRX5 114 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 IGHV3-48P01763 117 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 PROK1P58294 105 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 GPHB5Q86YW7 130 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 IFI27L1Q96BM0 104 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 OVOL2Q9BRP0 275 aa5.01□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV8-4A0A0B4J246 113 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV21A0A0B4J279 112 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 ATP6V0E1O15342 81 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 CKS2P33552 79 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 ORMDL2Q53FV1 153 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
PTPRB-203ENST00000538174 IGHV7-4-1A0A0J9YVY3 117 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 EPM2AB3EWF7 344 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 D6R8Y8 96 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 RBMY1CP0DJD4 496 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 RNF182Q8N6D2 247 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 C8orf49Q96NF6 230 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 LAMTOR3Q9UHA4 124 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 LCE6AA0A183 80 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 A8MTW9 85 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 F5H697 171 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 M0R3E3 92 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 LGALS9O00182 355 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 NFE4Q86UQ8 179 aa5□□□□□ -1.61
PTPRB-203ENST00000538174 TRBV6-5A0A0K0K1A5 114 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 HOXA3O43365 443 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-203ENST00000538174 PLNP26678 52 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 Q6YL49 198 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 NRACQ8N912 160 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 WFDC9Q8NEX5 89 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 MYOZ3Q8TDC0 251 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 RAB37Q96AX2 223 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 LINC00467Q9BRT7 94 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 TRAV12-2A0A075B6T6 113 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 IGKV3D-20A0A0C4DH25 116 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 IFI27P40305 119 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-203ENST00000538174 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-203ENST00000538174 TWIST1Q15672 202 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 DCANP1Q8TF63 244 aa4.99□□□□□ -1.61
PTPRB-203ENST00000538174 KLLNB2CW77 178 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 COX7CP15954 63 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 PIP4P2Q8N4L2 257 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 TM2D3Q9BRN9 247 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 IGKV2-40A0A087WW87 121 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-203ENST00000538174 IGHV3-21A0A0B4J1V1 117 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 IGKV2D-40P01614 121 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-203ENST00000538174 EGFEM1PQ0D2K5 195 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 DPH3P1Q9H4G8 78 aa4.98□□□□□ -1.61
PTPRB-203ENST00000538174 TCL1BO95988 128 aa4.97□□□□□ -1.61
PTPRB-203ENST00000538174 NPYP01303 97 aa4.97□□□□□ -1.61
PTPRB-203ENST00000538174 CD7P09564 240 aa4.97□□□□□ -1.61
PTPRB-203ENST00000538174 ZFAND2AQ8N6M9 145 aa4.97□□□□□ -1.61
PTPRB-203ENST00000538174 NEXN-AS1Q8NBZ9 246 aa4.97□□□□□ -1.61
PTPRB-203ENST00000538174 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms