RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
USP30-209ENST00000536723 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
USP30-209ENST00000536723 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
USP30-209ENST00000536723 C9orf116Q5BN46 136 aaPredicted RBP11.2□□□□□ -0.62
USP30-209ENST00000536723 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
USP30-209ENST00000536723 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
USP30-209ENST00000536723 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
USP30-209ENST00000536723 COTL1Q14019 142 aa11.18□□□□□ -0.62
USP30-209ENST00000536723 MZT2BQ6NZ67 158 aa11.18□□□□□ -0.62
USP30-209ENST00000536723 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
USP30-209ENST00000536723 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
USP30-209ENST00000536723 XCL1P47992 114 aa11.17□□□□□ -0.62
USP30-209ENST00000536723 UBE2D1P51668 147 aa11.16□□□□□ -0.62
USP30-209ENST00000536723 MED28Q9H204 178 aa11.16□□□□□ -0.62
USP30-209ENST00000536723 NIT2Q9NQR4 276 aa11.16□□□□□ -0.62
USP30-209ENST00000536723 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
USP30-209ENST00000536723 BCL2P10415 239 aa11.15□□□□□ -0.62
USP30-209ENST00000536723 AMMECR1LQ6DCA0 310 aa11.15□□□□□ -0.62
USP30-209ENST00000536723 CCDC32Q9BV29 185 aa11.15□□□□□ -0.62
USP30-209ENST00000536723 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
USP30-209ENST00000536723 TSPAN13O95857 204 aa11.14□□□□□ -0.63
USP30-209ENST00000536723 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
USP30-209ENST00000536723 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
USP30-209ENST00000536723 AKR1C3P42330 323 aa11.13□□□□□ -0.63
USP30-209ENST00000536723 CAMPP49913 170 aa11.13□□□□□ -0.63
USP30-209ENST00000536723 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
USP30-209ENST00000536723 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
USP30-209ENST00000536723 CCL25O15444 150 aa11.12□□□□□ -0.63
USP30-209ENST00000536723 FGF6P10767 208 aa11.12□□□□□ -0.63
USP30-209ENST00000536723 ENKURQ8TC29 256 aa11.12□□□□□ -0.63
USP30-209ENST00000536723 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
USP30-209ENST00000536723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
USP30-209ENST00000536723 A0A087WZ39 114 aa11.11□□□□□ -0.63
USP30-209ENST00000536723 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
USP30-209ENST00000536723 SSNA1O43805 119 aa11.11□□□□□ -0.63
USP30-209ENST00000536723 CST9LP1Q5W188 147 aa11.11□□□□□ -0.63
USP30-209ENST00000536723 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
USP30-209ENST00000536723 TCEAL7Q9BRU2 100 aa11.11□□□□□ -0.63
USP30-209ENST00000536723 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
USP30-209ENST00000536723 LINC00959A0A1B0GUT2 108 aa11.1□□□□□ -0.63
USP30-209ENST00000536723 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
USP30-209ENST00000536723 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
USP30-209ENST00000536723 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
USP30-209ENST00000536723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
USP30-209ENST00000536723 APOMO95445 188 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 NTF3P20783 257 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 FHITP49789 147 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 MEF2BQ02080 365 aaPredicted RBP11.09□□□□□ -0.63
USP30-209ENST00000536723 Q6ZNX1 250 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 NUP35Q8NFH5 326 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 ISOC2Q96AB3 205 aa11.09□□□□□ -0.63
USP30-209ENST00000536723 H7C423 109 aa11.07□□□□□ -0.64
USP30-209ENST00000536723 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
USP30-209ENST00000536723 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
USP30-209ENST00000536723 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
USP30-209ENST00000536723 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
USP30-209ENST00000536723 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
USP30-209ENST00000536723 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
USP30-209ENST00000536723 MAP1LC3B2A6NCE7 125 aa11.04□□□□□ -0.64
USP30-209ENST00000536723 RPL7L1Q6DKI1 246 aaKnown RBP11.04□□□□□ -0.64
USP30-209ENST00000536723 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
USP30-209ENST00000536723 MAP1LC3BQ9GZQ8 125 aa11.04□□□□□ -0.64
USP30-209ENST00000536723 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
USP30-209ENST00000536723 NCR2O95944 276 aa11.03□□□□□ -0.64
USP30-209ENST00000536723 APCSP02743 223 aa11.03□□□□□ -0.64
USP30-209ENST00000536723 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
USP30-209ENST00000536723 SS18Q15532 418 aa11.03□□□□□ -0.64
USP30-209ENST00000536723 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
USP30-209ENST00000536723 SCO2A0A1W2PP80 73 aa11.02□□□□□ -0.65
USP30-209ENST00000536723 PAGE4O60829 102 aa11.02□□□□□ -0.65
USP30-209ENST00000536723 TRGC1P0CF51 173 aa11.02□□□□□ -0.65
USP30-209ENST00000536723 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
USP30-209ENST00000536723 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
USP30-209ENST00000536723 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
USP30-209ENST00000536723 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
USP30-209ENST00000536723 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
USP30-209ENST00000536723 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
USP30-209ENST00000536723 BCL2L11O43521 198 aa11□□□□□ -0.65
USP30-209ENST00000536723 MALP21145 153 aa11□□□□□ -0.65
USP30-209ENST00000536723 DEFA1P59665 94 aa10.99□□□□□ -0.65
USP30-209ENST00000536723 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
USP30-209ENST00000536723 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
USP30-209ENST00000536723 C2orf48Q96LS8 159 aa10.99□□□□□ -0.65
USP30-209ENST00000536723 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
USP30-209ENST00000536723 RPP21Q9H633 154 aaKnown RBP10.98□□□□□ -0.65
USP30-209ENST00000536723 BORCS7-ASMTA0A0B4J1R7 106 aa10.97□□□□□ -0.65
USP30-209ENST00000536723 F2Z2F3 143 aa10.97□□□□□ -0.65
USP30-209ENST00000536723 RPS20P60866 119 aaKnown RBP10.97□□□□□ -0.65
USP30-209ENST00000536723 LYZL1Q6UWQ5 148 aa10.97□□□□□ -0.65
USP30-209ENST00000536723 TMUB2Q71RG4 321 aa10.97□□□□□ -0.65
USP30-209ENST00000536723 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
USP30-209ENST00000536723 COX7A2LO14548 114 aa10.96□□□□□ -0.65
USP30-209ENST00000536723 IFITM3Q01628 133 aa10.96□□□□□ -0.65
USP30-209ENST00000536723 RNF151Q2KHN1 245 aa10.96□□□□□ -0.65
USP30-209ENST00000536723 FAM19A5Q7Z5A7 132 aaPredicted RBP10.96□□□□□ -0.65
USP30-209ENST00000536723 RETNLBQ9BQ08 111 aa10.96□□□□□ -0.65
USP30-209ENST00000536723 UPK1BO75841 260 aa10.95□□□□□ -0.66
USP30-209ENST00000536723 ESDP10768 282 aa10.95□□□□□ -0.66
USP30-209ENST00000536723 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms