RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 THAP8Q8NA92 274 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 TYMSOSQ8TAI1 123 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 RNF185Q96GF1 192 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 TMEM141Q96I45 108 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 IMMP1LQ96LU5 166 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 AMELXQ99217 191 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 OVOL2Q9BRP0 275 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 TMEM14BQ9NUH8 114 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 TMEM14CQ9P0S9 112 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 MED12Q93074 2177 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 ESPL1Q14674 2120 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 DIDO1Q9BTC0 2240 aaKnown RBP1.74□□□□□ -2.13
SKA3-207ENST00000536239 IGHV1-45A0A0A0MS14 117 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 IGKV3D-7A0A0C4DH55 119 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 A0A0J9YXY3 114 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 IGIPA6NJ69 53 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 E7EQL1 145 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 H0YGG7 62 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 J3QT63 122 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 COX7A2LO14548 114 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 ZNF73O43830 326 aaPredicted RBP1.74□□□□□ -2.13
SKA3-207ENST00000536239 SH2D1AO60880 128 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 MIFP14174 115 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 CD70P32970 193 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 ZNF80P51504 273 aaPredicted RBP1.74□□□□□ -2.13
SKA3-207ENST00000536239 B3GALT5-AS1P59052 145 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 ERHP84090 104 aaKnown RBP1.74□□□□□ -2.13
SKA3-207ENST00000536239 PRCDQ00LT1 54 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 PATE2Q6UY27 113 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 ATP11AUNQ6ZP68 121 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 LCA10Q71F78 164 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
SKA3-207ENST00000536239 CLEC2BQ92478 149 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 SPRR3Q9UBC9 169 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 DSCAMO60469 2012 aa1.74□□□□□ -2.13
SKA3-207ENST00000536239 IGLV4-69A0A075B6H9 119 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 IGKV1D-17A0A075B6S4 117 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 TRAV23DV6A0A075B6W5 121 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 A0A087WVE0 104 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 IGHV5-51A0A0C4DH38 117 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 E7EUB6 86 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 TMEM256-PLSCR3K7ERE1 68 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 M0R1W7 72 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 M0R381 172 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 CLPSP04118 112 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 IGHV4-34P06331 123 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 RPL28P46779 137 aaKnown RBP1.73□□□□□ -2.13
SKA3-207ENST00000536239 CRIP1P50238 77 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 CXCL6P80162 114 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 PDE6HQ13956 83 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 NNATQ16517 81 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 TMEM61Q8N0U2 210 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 C14orf178Q8N769 122 aaPredicted RBP1.73□□□□□ -2.13
SKA3-207ENST00000536239 FLVCR1-AS1Q8TAF5 88 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 TIMM17AQ99595 171 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 SMIM2Q9BVW6 85 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 ESM1Q9NQ30 184 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 LINC00846Q9NV44 126 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 CTSZQ9UBR2 303 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 PHLDA3Q9Y5J5 127 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 CACNA1DQ01668 2161 aa1.73□□□□□ -2.13
SKA3-207ENST00000536239 USF3Q68DE3 2245 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 UNC13CQ8NB66 2214 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 IGHV5-10-1A0A0J9YXX1 117 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 A8MUN3 132 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 C12orf77C9JDV5 145 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 TRBV12-3P01733 135 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 IGHV1-69P01742 117 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 CD28P10747 220 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 CCL4P13236 92 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 FUSP35637 526 aaKnown RBP eCLIP1.72□□□□□ -2.13
SKA3-207ENST00000536239 UBE2AP49459 152 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 TSPEAR-AS2P59090 65 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 MIAQ16674 131 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 C2orf66Q6UXQ4 117 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 SOSTDC1Q6X4U4 206 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 C7orf65Q6ZTY9 151 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 CCL17Q92583 94 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 DIRC1Q969H9 104 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 RMI2Q96E14 147 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 BPESC1Q9GZL8 116 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 CXXC4Q9H2H0 198 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 Q9H8V8 135 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 C22orf24Q9Y442 160 aa1.72□□□□□ -2.13
SKA3-207ENST00000536239 KNTC1P50748 2209 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 FREM1Q5H8C1 2179 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 IGKV1D-37A0A075B6S9 117 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 LOC100131303A0A0U1RQF7 123 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 hDV103S1A0JD37 113 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 EPOPA6NHQ4 379 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 A6NN06 94 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 F6UB75 175 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 JMJD7-PLA2G4BH0Y9G9 81 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 H0YGX0 51 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 IGKV3-11P04433 115 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 ZNF32P17041 273 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 RNASE4P34096 147 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms