RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 EVI2AP22794 236 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 SRIP30626 198 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 OPRK1P41145 380 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 HINT1P49773 126 aaPredicted RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 RND2P52198 227 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 UBE2G1P62253 170 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 UBE2L3P68036 154 aaKnown RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 ERHP84090 104 aaKnown RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 PRCDQ00LT1 54 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 HIST1H1AQ02539 215 aaPredicted RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 AARDQ4LEZ3 155 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 LBHQ53QV2 105 aaPredicted RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 MIR17HGQ75NE6 70 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 COX8CQ7Z4L0 72 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 OR10J6PQ8NGY7 276 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 RNASE8Q8TDE3 154 aaKnown RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 KCNS1Q96KK3 526 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 MGST2Q99735 147 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 ALKBH7Q9BT30 221 aaPredicted RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 TPPP3Q9BW30 176 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 SNHG12Q9BXW3 62 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 RNASE7Q9H1E1 156 aaKnown RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF331Q9NQX6 463 aaPredicted RBP1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IL36BQ9NZH7 164 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 RNF24Q9Y225 148 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 CBY1Q9Y3M2 126 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TRGV2A0A075B6R0 118 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV5A0A0B4J249 113 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 LOC100131303A0A0U1RQF7 123 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 SERTM2A0A1B0GWG4 89 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 DLEU1O43261 78 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 NUPR1O60356 82 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF253O75346 499 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF324O75467 553 aaPredicted RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 HSBP1O75506 76 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 SLC25A5P05141 298 aaKnown RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 PFN1P07737 140 aaKnown RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TAS2R45P59539 299 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 KRTAP10-8P60410 259 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 YPEL3P61236 119 aaPredicted RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 GNG5P63218 68 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 VAMP3Q15836 100 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 PMCHL1Q16048 86 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 DNLZQ5SXM8 178 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 COL5A1-AS1Q5SY13 56 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 IBA57Q5T440 356 aaKnown RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 CD164L2Q6UWJ8 174 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM14EPQ6UXP3 125 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 Q6ZQT7 251 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 Q6ZRU5 148 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC01551Q86U37 167 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 OR4C5Q8NGB2 326 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 RNASEH2CQ8TDP1 164 aaKnown RBP1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 C16orf74Q96GX8 76 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 AP1S3Q96PC3 154 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 MIEN1Q9BRT3 115 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM167BQ9NRX6 74 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 KLF12Q9Y4X4 402 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 ICOSQ9Y6W8 199 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 USH2AO75445 5202 aa1.89□□□□□ -2.11
CHMP4A-208ENST00000534106 IGKV1D-37A0A075B6S9 117 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV30A0A087WSZ9 112 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 A0A087X0K7 114 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TMSB15BA0A087X1C1 80 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV12-3A0A0B4J271 114 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 K7EN84 100 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 K7EQD1 137 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 ISLRO14498 428 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 MPDU1O75352 247 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 DUSP14O95147 198 aaKnown RBP1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00869P0C866 280 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 STAG3L2P0CL84 134 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 STAG3L3P0CL85 134 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 PYYP10082 97 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 ORM2P19652 201 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 CRYBA4P53673 196 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 LYZP61626 148 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 SRSF9Q13242 221 aaKnown RBP eCLIP1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 COTL1Q14019 142 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 PSG3Q16557 428 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF876PQ49A33 203 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 C1orf194Q5T5A4 169 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 ZC2HC1BQ5TFG8 222 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 C10orf113Q5VZT2 155 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 Q6ZVH6 145 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 NEGR1Q7Z3B1 354 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 PRNTQ86SH4 94 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF738Q8NE65 137 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 OR2D3Q8NGH3 330 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 OR1B1Q8NGR6 318 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM263Q8WUH6 116 aaKnown RBP1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 PGLYRP4Q96LB8 373 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC01600Q96MT4 127 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms