RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
SSBP3-215ENST00000533946 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-215ENST00000533946 TRBV25-1A0A075B6N4 114 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 IGHV1-24A0A0C4DH33 117 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 TMEM250H0YL14 139 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
SSBP3-215ENST00000533946 BLOC1S1P78537 153 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 FAM210AQ96ND0 272 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 CHCHD7Q9BUK0 85 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 C1orf43Q9BWL3 253 aa6.21□□□□□ -1.42
SSBP3-215ENST00000533946 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.42
SSBP3-215ENST00000533946 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 TRGC1P0CF51 173 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 REG3AQ06141 175 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 WDR73Q6P4I2 378 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 FAM231DQ6ZW35 169 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 TMEM243Q9BU79 118 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 V9GYV3 84 aa6.2□□□□□ -1.42
SSBP3-215ENST00000533946 NCR2O95944 276 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 CRPP02741 224 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 Q0VG73 95 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 ELOBQ15370 118 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
SSBP3-215ENST00000533946 RMI2Q96E14 147 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
SSBP3-215ENST00000533946 XKRY2A2RUG3 117 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 ZNF727A8MUV8 499 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 TSHBP01222 138 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 AMTP48728 403 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 RPL23P62829 140 aaKnown RBP6.18□□□□□ -1.42
SSBP3-215ENST00000533946 MIAQ16674 131 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 KCNIP4Q6PIL6 250 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 AMN1Q8IY45 258 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 NUP35Q8NFH5 326 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
SSBP3-215ENST00000533946 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 H7C1H1 209 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 RAB4AP20338 218 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 TAGLN2P37802 199 aaKnown RBP6.17□□□□□ -1.42
SSBP3-215ENST00000533946 SDIM1Q6ZPB5 146 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 ISOC2Q96AB3 205 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 BIN3Q9NQY0 253 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 TMEM242Q9NWH2 141 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
SSBP3-215ENST00000533946 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 A8MWL6 223 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 COTL1Q14019 142 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 TSKUQ8WUA8 353 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 OSTCQ9NRP0 149 aa6.16□□□□□ -1.42
SSBP3-215ENST00000533946 A0A1B0GUT8 65 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 FGF6P10767 208 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 ESDP10768 282 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
SSBP3-215ENST00000533946 TMEM97Q5BJF2 176 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
SSBP3-215ENST00000533946 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 NRACQ8N912 160 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
SSBP3-215ENST00000533946 TNXBP22105 4242 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 hDV102S1A0JD36 115 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 ADIRFQ15847 76 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 CT83Q5H943 113 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
SSBP3-215ENST00000533946 CHCHD10Q8WYQ3 142 aaPredicted RBP6.14□□□□□ -1.43
SSBP3-215ENST00000533946 TMEM191AQ9H0A3 160 aa6.14□□□□□ -1.43
SSBP3-215ENST00000533946 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
SSBP3-215ENST00000533946 UBE2L6O14933 153 aa6.13□□□□□ -1.43
SSBP3-215ENST00000533946 PMCHP20382 165 aa6.13□□□□□ -1.43
SSBP3-215ENST00000533946 FOXI1Q12951 378 aa6.13□□□□□ -1.43
SSBP3-215ENST00000533946 MRPL51Q4U2R6 128 aaKnown RBP6.13□□□□□ -1.43
SSBP3-215ENST00000533946 SMIM27A0A1W2PRY6 76 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 I3L3M4 83 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 APCSP02743 223 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 CAMPP49913 170 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 ODF1Q14990 250 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-215ENST00000533946 PRSS3P2Q8NHM4 247 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-215ENST00000533946 ST20Q9HBF5 79 aa6.12□□□□□ -1.43
SSBP3-215ENST00000533946 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
SSBP3-215ENST00000533946 XCL1P47992 114 aa6.11□□□□□ -1.43
SSBP3-215ENST00000533946 CNBPP62633 177 aaKnown RBP6.11□□□□□ -1.43
SSBP3-215ENST00000533946 DGAT2L7PQ6IED9 249 aa6.11□□□□□ -1.43
SSBP3-215ENST00000533946 MRPL54Q6P161 138 aaKnown RBP6.11□□□□□ -1.43
SSBP3-215ENST00000533946 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 TRBV27A0A0K0K1C4 114 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 CCL25O15444 150 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 PKIAP61925 76 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
SSBP3-215ENST00000533946 COX6A2Q02221 97 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms