RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FAM30AQ9NZY2 134 aa19.87■□□□□ 0.77
SSSCA1-207ENST00000533115 HIGD1CA8MV81 97 aa19.85■□□□□ 0.77
SSSCA1-207ENST00000533115 FAM74A3Q4VXF1 159 aa19.85■□□□□ 0.77
SSSCA1-207ENST00000533115 RPL39LQ96EH5 51 aaKnown RBP19.85■□□□□ 0.77
SSSCA1-207ENST00000533115 A0A1B0GUV1 79 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 FAM231BA6NCW3 169 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 AMTP48728 403 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 TMEM241Q24JQ0 296 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 C14orf177Q52M58 125 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 C20orf203Q8NBC4 194 aa19.84■□□□□ 0.77
SSSCA1-207ENST00000533115 A0A1B0GUT8 65 aa19.83■□□□□ 0.77
SSSCA1-207ENST00000533115 SMR3BP02814 79 aaPredicted RBP19.83■□□□□ 0.77
SSSCA1-207ENST00000533115 C9JQL5 133 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 UBE2L6O14933 153 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 HLA-DQA1P01909 254 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 REG3AQ06141 175 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 Q5VSD8 79 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 ISOC2Q96AB3 205 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 V9GYV3 84 aa19.82■□□□□ 0.76
SSSCA1-207ENST00000533115 IGLV4-60A0A075B6I1 120 aa19.81■□□□□ 0.76
SSSCA1-207ENST00000533115 VPS13BQ7Z7G8 4022 aa19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 RPL23P62829 140 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 SRSF3P84103 164 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 PEA15Q15121 130 aa19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 LINC01620Q4KN68 170 aa19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 KRTAP26-1Q6PEX3 210 aa19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 Q6ZSA8 131 aa19.8■□□□□ 0.76
SSSCA1-207ENST00000533115 TMEM191AQ9H0A3 160 aa19.79■□□□□ 0.76
SSSCA1-207ENST00000533115 USP17L23D6RBM5 183 aa19.78■□□□□ 0.76
SSSCA1-207ENST00000533115 NAT8Q9UHE5 227 aa19.78■□□□□ 0.76
SSSCA1-207ENST00000533115 SDHAF1A6NFY7 115 aa19.77■□□□□ 0.76
SSSCA1-207ENST00000533115 NCR2O95944 276 aa19.77■□□□□ 0.76
SSSCA1-207ENST00000533115 SMDT1Q9H4I9 107 aa19.77■□□□□ 0.76
SSSCA1-207ENST00000533115 ADIRFQ15847 76 aa19.76■□□□□ 0.75
SSSCA1-207ENST00000533115 IGLV10-54A0A075B6I4 117 aa19.75■□□□□ 0.75
SSSCA1-207ENST00000533115 TRAV8-4A0A0B4J246 113 aa19.75■□□□□ 0.75
SSSCA1-207ENST00000533115 TRBV6-5A0A0K0K1A5 114 aa19.75■□□□□ 0.75
SSSCA1-207ENST00000533115 NUP35Q8NFH5 326 aa19.75■□□□□ 0.75
SSSCA1-207ENST00000533115 RNF185Q96GF1 192 aa19.74■□□□□ 0.75
SSSCA1-207ENST00000533115 FAM229AH3BQW9 127 aa19.73■□□□□ 0.75
SSSCA1-207ENST00000533115 GAS8-AS1O95177 125 aa19.73■□□□□ 0.75
SSSCA1-207ENST00000533115 APCSP02743 223 aa19.73■□□□□ 0.75
SSSCA1-207ENST00000533115 RIGQ13278 110 aa19.73■□□□□ 0.75
SSSCA1-207ENST00000533115 I3L3M4 83 aa19.72■□□□□ 0.75
SSSCA1-207ENST00000533115 RAB4AP20338 218 aa19.72■□□□□ 0.75
SSSCA1-207ENST00000533115 NAT8BQ9UHF3 227 aa19.72■□□□□ 0.75
SSSCA1-207ENST00000533115 PRSS1P07477 247 aa19.71■□□□□ 0.75
SSSCA1-207ENST00000533115 PMCHP20382 165 aa19.71■□□□□ 0.75
SSSCA1-207ENST00000533115 ST20Q9HBF5 79 aa19.71■□□□□ 0.75
SSSCA1-207ENST00000533115 H7C423 109 aa19.7■□□□□ 0.74
SSSCA1-207ENST00000533115 INAFM2P0DMQ5 153 aa19.7■□□□□ 0.74
SSSCA1-207ENST00000533115 AMN1Q8IY45 258 aa19.7■□□□□ 0.74
SSSCA1-207ENST00000533115 MRAP2Q96G30 205 aa19.7■□□□□ 0.74
SSSCA1-207ENST00000533115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.69■□□□□ 0.74
SSSCA1-207ENST00000533115 IGKV2-29A2NJV5 120 aaPredicted RBP19.69■□□□□ 0.74
SSSCA1-207ENST00000533115 AMMECR1LQ6DCA0 310 aa19.69■□□□□ 0.74
SSSCA1-207ENST00000533115 RPS10P46783 165 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-207ENST00000533115 SRRM2Q9UQ35 2752 aaKnown RBP19.66■□□□□ 0.74
SSSCA1-207ENST00000533115 SMIM27A0A1W2PRY6 76 aa19.66■□□□□ 0.74
SSSCA1-207ENST00000533115 DGAT2L7PQ6IED9 249 aa19.66■□□□□ 0.74
SSSCA1-207ENST00000533115 RNASEKQ6P5S7 137 aaKnown RBP19.66■□□□□ 0.74
SSSCA1-207ENST00000533115 FGF6P10767 208 aa19.65■□□□□ 0.74
SSSCA1-207ENST00000533115 POLR2KP53803 58 aaKnown RBP19.65■□□□□ 0.74
SSSCA1-207ENST00000533115 CLRN3Q8NCR9 226 aa19.65■□□□□ 0.74
SSSCA1-207ENST00000533115 TSHBP01222 138 aa19.64■□□□□ 0.73
SSSCA1-207ENST00000533115 SCXQ7RTU7 201 aa19.64■□□□□ 0.73
SSSCA1-207ENST00000533115 CHAC1Q9BUX1 264 aa19.63■□□□□ 0.73
SSSCA1-207ENST00000533115 TMEM242Q9NWH2 141 aa19.63■□□□□ 0.73
SSSCA1-207ENST00000533115 IGKV3OR2-268A0A0C4DH90 116 aa19.62■□□□□ 0.73
SSSCA1-207ENST00000533115 TRBV27A0A0K0K1C4 114 aa19.62■□□□□ 0.73
SSSCA1-207ENST00000533115 SMKR1H3BMG3 65 aa19.62■□□□□ 0.73
SSSCA1-207ENST00000533115 ESDP10768 282 aa19.62■□□□□ 0.73
SSSCA1-207ENST00000533115 ZNF25P17030 456 aaPredicted RBP19.61■□□□□ 0.73
SSSCA1-207ENST00000533115 C9orf163Q8N9P6 203 aa19.6■□□□□ 0.73
SSSCA1-207ENST00000533115 PPP1R17O96001 155 aa19.59■□□□□ 0.73
SSSCA1-207ENST00000533115 FAM104BQ5XKR9 115 aa19.59■□□□□ 0.73
SSSCA1-207ENST00000533115 LINC00528Q8N1L1 170 aa19.59■□□□□ 0.73
SSSCA1-207ENST00000533115 A0A1B0GW15 77 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 hDV102S1A0JD36 115 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 GAGE12HA6NDE8 117 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 CAMPP49913 170 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 NRACQ8N912 160 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 TMEM101Q96IK0 257 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 BTF3L4Q96K17 158 aa19.58■□□□□ 0.72
SSSCA1-207ENST00000533115 VCYO14598 125 aa19.57■□□□□ 0.72
SSSCA1-207ENST00000533115 MRPL51Q4U2R6 128 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-207ENST00000533115 CIRBP-AS1Q8TBR5 109 aa19.57■□□□□ 0.72
SSSCA1-207ENST00000533115 CNBPP62633 177 aaKnown RBP19.55■□□□□ 0.72
SSSCA1-207ENST00000533115 CHCHD10Q8WYQ3 142 aaPredicted RBP19.55■□□□□ 0.72
SSSCA1-207ENST00000533115 PLA2G1BP04054 148 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-207ENST00000533115 RAB14P61106 215 aa19.54■□□□□ 0.72
SSSCA1-207ENST00000533115 SUMO2P61956 95 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-207ENST00000533115 OR5A1Q8NGJ0 315 aa19.54■□□□□ 0.72
SSSCA1-207ENST00000533115 C7orf77A4D0Y5 90 aa19.53■□□□□ 0.72
SSSCA1-207ENST00000533115 AP5S1Q9NUS5 200 aa19.53■□□□□ 0.72
SSSCA1-207ENST00000533115 LINC00862A6NCI5 91 aa19.52■□□□□ 0.72
SSSCA1-207ENST00000533115 FCER1GP30273 86 aa19.52■□□□□ 0.72
SSSCA1-207ENST00000533115 MRPL54Q6P161 138 aaKnown RBP19.52■□□□□ 0.72
SSSCA1-207ENST00000533115 CFAP161Q6P656 301 aa19.52■□□□□ 0.72
SSSCA1-207ENST00000533115 MRPL52Q86TS9 123 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 865.6 ms