RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 MAP1LC3B2A6NCE7 125 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 AKR1C8PQ5T2L2 129 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 LINC00299Q6ZSB3 139 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 BAGE2Q86Y30 109 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
CDC27-209ENST00000532893 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 MAP1LC3BQ9GZQ8 125 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 NDUFA13Q9P0J0 144 aa8.88□□□□□ -0.99
CDC27-209ENST00000532893 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
CDC27-209ENST00000532893 AMTP48728 403 aa8.87□□□□□ -0.99
CDC27-209ENST00000532893 Q5BKY6 102 aa8.87□□□□□ -0.99
CDC27-209ENST00000532893 PGLYRP4Q96LB8 373 aa8.87□□□□□ -0.99
CDC27-209ENST00000532893 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
CDC27-209ENST00000532893 PAGE4O60829 102 aa8.86□□□□□ -0.99
CDC27-209ENST00000532893 COTL1Q14019 142 aa8.86□□□□□ -0.99
CDC27-209ENST00000532893 RASL11AQ6T310 242 aa8.86□□□□□ -0.99
CDC27-209ENST00000532893 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
CDC27-209ENST00000532893 TPPP3Q9BW30 176 aa8.86□□□□□ -0.99
CDC27-209ENST00000532893 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
CDC27-209ENST00000532893 S100A9P06702 114 aaKnown RBP8.85□□□□□ -0.99
CDC27-209ENST00000532893 NIT2Q9NQR4 276 aa8.85□□□□□ -0.99
CDC27-209ENST00000532893 SCO2A0A1W2PP80 73 aa8.84□□□□□ -0.99
CDC27-209ENST00000532893 FOXI1Q12951 378 aa8.83□□□□□ -1
CDC27-209ENST00000532893 ZNF664Q8N3J9 261 aa8.83□□□□□ -1
CDC27-209ENST00000532893 CARD19Q96LW7 228 aa8.83□□□□□ -1
CDC27-209ENST00000532893 PSORS1C2Q9UIG4 136 aa8.83□□□□□ -1
CDC27-209ENST00000532893 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
CDC27-209ENST00000532893 ALG5Q9Y673 324 aa8.83□□□□□ -1
CDC27-209ENST00000532893 AMMECR1LQ6DCA0 310 aa8.82□□□□□ -1
CDC27-209ENST00000532893 PRR26Q8N8Z3 221 aa8.82□□□□□ -1
CDC27-209ENST00000532893 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
CDC27-209ENST00000532893 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
CDC27-209ENST00000532893 IGLC6P0CF74 106 aa8.81□□□□□ -1
CDC27-209ENST00000532893 DEFA1P59665 94 aa8.81□□□□□ -1
CDC27-209ENST00000532893 RNASEKQ6P5S7 137 aaKnown RBP8.81□□□□□ -1
CDC27-209ENST00000532893 TMUB2Q71RG4 321 aa8.81□□□□□ -1
CDC27-209ENST00000532893 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.8□□□□□ -1
CDC27-209ENST00000532893 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
CDC27-209ENST00000532893 A0A0U1RQV1 116 aa8.8□□□□□ -1
CDC27-209ENST00000532893 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
CDC27-209ENST00000532893 A0A1W2PNN7 141 aa8.8□□□□□ -1
CDC27-209ENST00000532893 IGKV2-29A2NJV5 120 aaPredicted RBP8.8□□□□□ -1
CDC27-209ENST00000532893 MT-ND6P03923 174 aa8.8□□□□□ -1
CDC27-209ENST00000532893 XCL1P47992 114 aa8.8□□□□□ -1
CDC27-209ENST00000532893 PTTG1IPP53801 180 aa8.8□□□□□ -1
CDC27-209ENST00000532893 CACNG7P62955 275 aa8.8□□□□□ -1
CDC27-209ENST00000532893 GAGE2BQ13066 116 aa8.8□□□□□ -1
CDC27-209ENST00000532893 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
CDC27-209ENST00000532893 A0A1B0GV50 99 aa8.79□□□□□ -1
CDC27-209ENST00000532893 SYCNQ0VAF6 134 aa8.79□□□□□ -1
CDC27-209ENST00000532893 OR2D3Q8NGH3 330 aa8.79□□□□□ -1
CDC27-209ENST00000532893 MED28Q9H204 178 aa8.79□□□□□ -1
CDC27-209ENST00000532893 TRGC1P0CF51 173 aa8.78□□□□□ -1
CDC27-209ENST00000532893 FGF6P10767 208 aa8.78□□□□□ -1
CDC27-209ENST00000532893 NTF3P20783 257 aa8.78□□□□□ -1
CDC27-209ENST00000532893 PRR4Q16378 134 aa8.78□□□□□ -1
CDC27-209ENST00000532893 C1orf137Q5JT78 98 aa8.78□□□□□ -1
CDC27-209ENST00000532893 Q6ZNX1 250 aa8.78□□□□□ -1
CDC27-209ENST00000532893 SFT2D1Q8WV19 159 aa8.78□□□□□ -1
CDC27-209ENST00000532893 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
CDC27-209ENST00000532893 CCL25O15444 150 aa8.77□□□□□ -1.01
CDC27-209ENST00000532893 PFDN1O60925 122 aa8.77□□□□□ -1.01
CDC27-209ENST00000532893 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
CDC27-209ENST00000532893 LYZL1Q6UWQ5 148 aa8.77□□□□□ -1.01
CDC27-209ENST00000532893 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 F2Z2F3 143 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 RPL35P42766 123 aaKnown RBP8.76□□□□□ -1.01
CDC27-209ENST00000532893 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
CDC27-209ENST00000532893 H7C423 109 aa8.75□□□□□ -1.01
CDC27-209ENST00000532893 GIPP09681 153 aaPredicted RBP8.75□□□□□ -1.01
CDC27-209ENST00000532893 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
CDC27-209ENST00000532893 MBD3L1Q8WWY6 194 aa8.75□□□□□ -1.01
CDC27-209ENST00000532893 CYTL1Q9NRR1 136 aa8.75□□□□□ -1.01
CDC27-209ENST00000532893 APCSP02743 223 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 BCL2P10415 239 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 CAMPP49913 170 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
CDC27-209ENST00000532893 KCNRGQ8N5I3 272 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 FAM213BQ8TBF2 198 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
CDC27-209ENST00000532893 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
CDC27-209ENST00000532893 NCR2O95944 276 aa8.73□□□□□ -1.01
CDC27-209ENST00000532893 IFNA1P01562 189 aa8.73□□□□□ -1.01
CDC27-209ENST00000532893 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
CDC27-209ENST00000532893 IGLV4-69A0A075B6H9 119 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 XKRY2A2RUG3 117 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 IGLV7-43P04211 117 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 ZNF25P17030 456 aaPredicted RBP8.72□□□□□ -1.01
CDC27-209ENST00000532893 SS18Q15532 418 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 ISOC2Q96AB3 205 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
CDC27-209ENST00000532893 TWIST1Q15672 202 aa8.71□□□□□ -1.02
CDC27-209ENST00000532893 CENPWQ5EE01 88 aa8.71□□□□□ -1.02
CDC27-209ENST00000532893 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.02
CDC27-209ENST00000532893 NUP35Q8NFH5 326 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms