RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	SMIM27	A0A1W2PRY6	76 aa		11.54	□□□□□ -0.56
CTSB-223	ENST00000532370	BAALC	Q8WXS3	180 aa		11.54	□□□□□ -0.56
CTSB-223	ENST00000532370	FRZB	Q92765	325 aa		11.54	□□□□□ -0.56
CTSB-223	ENST00000532370	TMEM191A	Q9H0A3	160 aa		11.54	□□□□□ -0.56
CTSB-223	ENST00000532370	NAT8B	Q9UHF3	227 aa		11.54	□□□□□ -0.56
CTSB-223	ENST00000532370	DNAH8	Q96JB1	4490 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	RIG	Q13278	110 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	CDPF1	Q6NVV7	123 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	AMN1	Q8IY45	258 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370		Q8N814	137 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	TMEM243	Q9BU79	118 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	KRTAP17-1	Q9BYP8	105 aa		11.53	□□□□□ -0.56
CTSB-223	ENST00000532370	PPP1R2P9	O14990	202 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	CDK2AP2	O75956	126 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	RAB4A	P20338	218 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	KRTAP10-1	P60331	282 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	PKIA	P61925	76 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	COTL1	Q14019	142 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	CLPSL2	Q6UWE3	100 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	RMI2	Q96E14	147 aa		11.52	□□□□□ -0.57
CTSB-223	ENST00000532370	SDHAF1	A6NFY7	115 aa		11.51	□□□□□ -0.57
CTSB-223	ENST00000532370	RPS10	P46783	165 aa	Known RBP	11.51	□□□□□ -0.57
CTSB-223	ENST00000532370		Q0VG73	95 aa		11.51	□□□□□ -0.57
CTSB-223	ENST00000532370	LINC00269	Q8N2A0	174 aa		11.51	□□□□□ -0.57
CTSB-223	ENST00000532370	IGLV4-60	A0A075B6I1	120 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	SMKR1	H3BMG3	65 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	CRP	P02741	224 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	MT-ND4L	P03901	98 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	AMT	P48728	403 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	ANAPC16	Q96DE5	110 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	COX11	Q9Y6N1	276 aa		11.5	□□□□□ -0.57
CTSB-223	ENST00000532370	IGLV5-52	A0A0A0MRZ9	124 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	TRBV6-5	A0A0K0K1A5	114 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	NCR2	O95944	276 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	CAMP	P49913	170 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	C20orf203	Q8NBC4	194 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	PRR34	Q9NV39	138 aa		11.49	□□□□□ -0.57
CTSB-223	ENST00000532370	GCSH	P23434	173 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	NDUFA5	Q16718	116 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	MRAP2	Q96G30	205 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	C1orf43	Q9BWL3	253 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	ST20	Q9HBF5	79 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	FAT1	Q14517	4588 aa		11.48	□□□□□ -0.57
CTSB-223	ENST00000532370	UBE2L6	O14933	153 aa		11.47	□□□□□ -0.57
CTSB-223	ENST00000532370	MRPL54	Q6P161	138 aa	Known RBP	11.47	□□□□□ -0.57
CTSB-223	ENST00000532370	NTN5	Q8WTR8	489 aa	Predicted RBP	11.47	□□□□□ -0.57
CTSB-223	ENST00000532370	TMEM70	Q9BUB7	260 aa		11.47	□□□□□ -0.57
CTSB-223	ENST00000532370	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.46	□□□□□ -0.57
CTSB-223	ENST00000532370		A0A1B0GUV1	79 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.46	□□□□□ -0.57
CTSB-223	ENST00000532370		I3L3M4	83 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	PMCH	P20382	165 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	MIA	Q16674	131 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	FAM104B	Q5XKR9	115 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	KRTAP4-5	Q9BYR2	181 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	CTDSP1	Q9GZU7	261 aa		11.46	□□□□□ -0.57
CTSB-223	ENST00000532370	TSHB	P01222	138 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	APCS	P02743	223 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	POLR2K	P53803	58 aa	Known RBP	11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	REG3A	Q06141	175 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	RHEB	Q15382	184 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	MRPL51	Q4U2R6	128 aa	Known RBP	11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	SLC7A5P1	Q8MH63	180 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	NRAC	Q8N912	160 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	CLRN3	Q8NCR9	226 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	TMEM242	Q9NWH2	141 aa		11.45	□□□□□ -0.58
CTSB-223	ENST00000532370	IGLV10-54	A0A075B6I4	117 aa		11.44	□□□□□ -0.58
CTSB-223	ENST00000532370		A0A1B0GXF2	115 aa		11.44	□□□□□ -0.58
CTSB-223	ENST00000532370	KRTAP26-1	Q6PEX3	210 aa		11.44	□□□□□ -0.58
CTSB-223	ENST00000532370	IMMP2L	Q96T52	175 aa		11.44	□□□□□ -0.58
CTSB-223	ENST00000532370		A0A1B0GW15	77 aa		11.43	□□□□□ -0.58
CTSB-223	ENST00000532370	C7orf77	A4D0Y5	90 aa		11.43	□□□□□ -0.58
CTSB-223	ENST00000532370	HLA-DQA1	P01909	254 aa		11.43	□□□□□ -0.58
CTSB-223	ENST00000532370	XG	P55808	180 aa		11.43	□□□□□ -0.58
CTSB-223	ENST00000532370	HBB	P68871	147 aa		11.43	□□□□□ -0.58
CTSB-223	ENST00000532370	TRBV27	A0A0K0K1C4	114 aa		11.42	□□□□□ -0.58
CTSB-223	ENST00000532370	APOC3	P02656	99 aa		11.42	□□□□□ -0.58
CTSB-223	ENST00000532370	SVBP	Q8N300	66 aa		11.42	□□□□□ -0.58
CTSB-223	ENST00000532370	FGF6	P10767	208 aa		11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	HAMP	P81172	84 aa		11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	LINC01620	Q4KN68	170 aa		11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	AMMECR1L	Q6DCA0	310 aa		11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	RNASEK	Q6P5S7	137 aa	Known RBP	11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	ATP5L2	Q7Z4Y8	100 aa		11.41	□□□□□ -0.58
CTSB-223	ENST00000532370	IGKV3OR2-268	A0A0C4DH90	116 aa		11.4	□□□□□ -0.58
CTSB-223	ENST00000532370	USP17L23	D6RBM5	183 aa		11.4	□□□□□ -0.58
CTSB-223	ENST00000532370	SNAPIN	O95295	136 aa		11.4	□□□□□ -0.58
CTSB-223	ENST00000532370	ESD	P10768	282 aa		11.4	□□□□□ -0.58
CTSB-223	ENST00000532370	SUMO2	P61956	95 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-223	ENST00000532370	FAM30A	Q9NZY2	134 aa		11.4	□□□□□ -0.58
CTSB-223	ENST00000532370		H7C423	109 aa		11.39	□□□□□ -0.59
CTSB-223	ENST00000532370	VCY	O14598	125 aa		11.39	□□□□□ -0.59
CTSB-223	ENST00000532370	CKS2	P33552	79 aa		11.39	□□□□□ -0.59
CTSB-223	ENST00000532370	TRAV9-1	A0A075B6T8	112 aa		11.38	□□□□□ -0.59
CTSB-223	ENST00000532370		D6R8Y8	96 aa		11.38	□□□□□ -0.59
CTSB-223	ENST00000532370	PPP1R17	O96001	155 aa		11.38	□□□□□ -0.59
CTSB-223	ENST00000532370	S100A8	P05109	93 aa		11.38	□□□□□ -0.59
CTSB-223	ENST00000532370	TRAV8-4	A0A0B4J246	113 aa		11.37	□□□□□ -0.59
CTSB-223	ENST00000532370		Q8N1X5	172 aa		11.37	□□□□□ -0.59

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