RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 MYH6P13533 1939 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 SONP18583 2426 aaKnown RBP-0.64□□□□□ -2.51
PATL1-202ENST00000531919 DOPEY1Q5JWR5 2465 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 FAM236AA0A1B0GUQ0 79 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 FAM236BA0A1B0GV22 79 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 M0R129 80 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 PIN1P1O15428 100 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 EDDM3BP56851 147 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 CCDC153Q494R4 210 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 MIC13Q5XKP0 118 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 VSTM2AQ8TAG5 236 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 SELENOSQ9BQE4 189 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 SPG11Q96JI7 2443 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 EPPK1P58107 5090 aaKnown RBP-0.64□□□□□ -2.51
PATL1-202ENST00000531919 NBPF19A0A087WUL8 3843 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 KIAA1109Q2LD37 5005 aa-0.64□□□□□ -2.51
PATL1-202ENST00000531919 FAT3Q8TDW7 4589 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 WNK3Q9BYP7 1800 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 TRAV1-2A0A0B4J238 106 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 I3L2K1 104 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 M0R2T5 61 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 C10orf71Q711Q0 1435 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 MYO18BQ8IUG5 2567 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 PKHD1L1Q86WI1 4243 aa-0.65□□□□□ -2.51
PATL1-202ENST00000531919 DNAH9Q9NYC9 4486 aa-0.66□□□□□ -2.51
PATL1-202ENST00000531919 BCE1O60756 84 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 SPRR1BP22528 89 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 B2MP61769 119 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 C9orf116Q5BN46 136 aaPredicted RBP-0.66□□□□□ -2.52
PATL1-202ENST00000531919 TAC4Q86UU9 113 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 OVOS2A0A0J9YW53 1432 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 OVOS2Q6IE36 1432 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 PRG4Q92954 1404 aaPredicted RBP-0.66□□□□□ -2.52
PATL1-202ENST00000531919 USP9YO00507 2555 aaPredicted RBP-0.66□□□□□ -2.52
PATL1-202ENST00000531919 DNAH3Q8TD57 4116 aa-0.66□□□□□ -2.52
PATL1-202ENST00000531919 NBASA2RRP1 2371 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 LRRC37A3O60309 1634 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 KDM3BQ7LBC6 1761 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 TRAV22A0A0B4J277 110 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 PIRTP0C851 137 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 IGLC6P0CF74 106 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 KLK9Q2XQG4 91 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 SPANXN1Q5VSR9 72 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 SPRR2FQ96RM1 72 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 AIF1LQ9BQI0 150 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 SPCS1Q9Y6A9 102 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.67□□□□□ -2.52
PATL1-202ENST00000531919 LAMA1P25391 3075 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 BICRAQ9NZM4 1560 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 IQSEC2Q5JU85 1478 aa-0.67□□□□□ -2.52
PATL1-202ENST00000531919 MT1AP04731 61 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 DBIP07108 87 aaKnown RBP-0.68□□□□□ -2.52
PATL1-202ENST00000531919 HAMPP81172 84 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 SPAG11AQ6PDA7 123 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 TP53AIP1Q9HCN2 124 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 SPANXCQ9NY87 97 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 TSC2P49815 1807 aa-0.68□□□□□ -2.52
PATL1-202ENST00000531919 ARHGEF10O15013 1369 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 TMEM2Q9UHN6 1383 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 PRDM2Q13029 1718 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 LOC730098B7Z3J9 87 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 APOC4-APOC2K7ER74 178 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 TSPAN19P0C672 248 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 NCS1P62166 190 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 HIST1H1AQ02539 215 aaPredicted RBP-0.69□□□□□ -2.52
PATL1-202ENST00000531919 DEFB123Q8N688 67 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 SDF2Q99470 211 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 LINC00472Q9H8W2 130 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 SAR1AQ9NR31 198 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 KNL1Q8NG31 2342 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 FASNP49327 2511 aaKnown RBP-0.69□□□□□ -2.52
PATL1-202ENST00000531919 BIRC6Q9NR09 4857 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 HECTD1Q9ULT8 2610 aa-0.69□□□□□ -2.52
PATL1-202ENST00000531919 LAMA2P24043 3122 aaKnown RBP-0.7□□□□□ -2.52
PATL1-202ENST00000531919 ZNF609O15014 1411 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 SPTBN4Q9H254 2564 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 LRP6O75581 1613 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 COX6B1P14854 86 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 S100A3P33764 101 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 UBE2G1P62253 170 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 DCDP81605 110 aaKnown RBP-0.7□□□□□ -2.52
PATL1-202ENST00000531919 Q6ZUT4 128 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 SPANXA1Q9NS26 97 aa-0.7□□□□□ -2.52
PATL1-202ENST00000531919 HTTP42858 3142 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 PAPPAQ13219 1627 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 DISP2A7MBM2 1401 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 DAPK1P53355 1430 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 DOCK1Q14185 1865 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.71□□□□□ -2.524e-7■■■■□ 26.6
PATL1-202ENST00000531919 PXDNQ92626 1479 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 TEP1Q99973 2627 aaKnown RBP-0.71□□□□□ -2.52
PATL1-202ENST00000531919 TRBV6-1A0A0K0K1D8 114 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 SPINK4O60575 86 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 LINC00694P0DN24 101 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 SCGB1A1P11684 91 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 MRPL40Q9NQ50 206 aaKnown RBP-0.71□□□□□ -2.52
PATL1-202ENST00000531919 RPRMQ9NS64 109 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 SCN3BQ9NY72 215 aa-0.71□□□□□ -2.52
PATL1-202ENST00000531919 CASKIN1Q8WXD9 1431 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms