RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 SLC51BQ86UW2 128 aa8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 TCTE3Q8IZS6 198 aa8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
AMBRA1-210ENST00000531542 COTL1Q14019 142 aa8.53□□□□□ -1.04
AMBRA1-210ENST00000531542 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
AMBRA1-210ENST00000531542 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.05
AMBRA1-210ENST00000531542 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
AMBRA1-210ENST00000531542 PANO1I0J062 215 aa8.52□□□□□ -1.05
AMBRA1-210ENST00000531542 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
AMBRA1-210ENST00000531542 RPP21Q9H633 154 aaKnown RBP8.52□□□□□ -1.05
AMBRA1-210ENST00000531542 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 H7C423 109 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 UBE2L6O14933 153 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 NCR2O95944 276 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 AMTP48728 403 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 TWIST1Q15672 202 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 TEX261Q6UWH6 196 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 FAT3Q8TDW7 4589 aa8.51□□□□□ -1.05
AMBRA1-210ENST00000531542 SLPIP03973 132 aa8.5□□□□□ -1.05
AMBRA1-210ENST00000531542 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
AMBRA1-210ENST00000531542 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
AMBRA1-210ENST00000531542 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
AMBRA1-210ENST00000531542 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
AMBRA1-210ENST00000531542 K7EN84 100 aa8.49□□□□□ -1.05
AMBRA1-210ENST00000531542 HNRNPA3P51991 378 aaKnown RBP8.49□□□□□ -1.05
AMBRA1-210ENST00000531542 Q6ZRU5 148 aa8.49□□□□□ -1.05
AMBRA1-210ENST00000531542 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 GTSF1Q8WW33 167 aa8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
AMBRA1-210ENST00000531542 TRBV6-5A0A0K0K1A5 114 aa8.47□□□□□ -1.05
AMBRA1-210ENST00000531542 CT83Q5H943 113 aa8.47□□□□□ -1.05
AMBRA1-210ENST00000531542 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
AMBRA1-210ENST00000531542 LYPD6BQ8NI32 183 aa8.47□□□□□ -1.05
AMBRA1-210ENST00000531542 PLAC8Q9NZF1 115 aa8.47□□□□□ -1.05
AMBRA1-210ENST00000531542 A0A087WYN8 130 aa8.46□□□□□ -1.06
AMBRA1-210ENST00000531542 TRAV26-2A0A0B4J265 109 aa8.46□□□□□ -1.06
AMBRA1-210ENST00000531542 A8MWL6 223 aa8.46□□□□□ -1.06
AMBRA1-210ENST00000531542 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
AMBRA1-210ENST00000531542 ZNF25P17030 456 aaPredicted RBP8.46□□□□□ -1.06
AMBRA1-210ENST00000531542 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 SDHAF1A6NFY7 115 aa8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 RPS10P46783 165 aaKnown RBP8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 BLOC1S1P78537 153 aa8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 Q6ZNX1 250 aa8.45□□□□□ -1.06
AMBRA1-210ENST00000531542 GVQW2A0A096LPI5 108 aaPredicted RBP8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 I3L3M4 83 aa8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 APCSP02743 223 aa8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 FGF6P10767 208 aa8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
AMBRA1-210ENST00000531542 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
AMBRA1-210ENST00000531542 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
AMBRA1-210ENST00000531542 OR5A1Q8NGJ0 315 aa8.43□□□□□ -1.06
AMBRA1-210ENST00000531542 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
AMBRA1-210ENST00000531542 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
AMBRA1-210ENST00000531542 ESDP10768 282 aa8.42□□□□□ -1.06
AMBRA1-210ENST00000531542 COX6A2Q02221 97 aa8.42□□□□□ -1.06
AMBRA1-210ENST00000531542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 PMCHP20382 165 aa8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 FOXI1Q12951 378 aa8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
AMBRA1-210ENST00000531542 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 BORCS7Q96B45 105 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 TMEM101Q96IK0 257 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 BTF3L4Q96K17 158 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 LINC00474Q9P2X8 69 aa8.4□□□□□ -1.06
AMBRA1-210ENST00000531542 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 A0A1B0GUT8 65 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 TSHBP01222 138 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 HIGD2BQ4VC39 106 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
AMBRA1-210ENST00000531542 IGHV1-58A0A0C4DH39 117 aa8.38□□□□□ -1.07
AMBRA1-210ENST00000531542 HIGD1CA8MV81 97 aa8.38□□□□□ -1.07
AMBRA1-210ENST00000531542 PHOX2AO14813 284 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms