RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 CFAP161Q6P656 301 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 PGLYRP4Q96LB8 373 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 UBE2L6O14933 153 aa13.05□□□□□ -0.32
CHKA-206ENST00000531341 TMUB2Q71RG4 321 aa13.05□□□□□ -0.32
CHKA-206ENST00000531341 AMTP48728 403 aa13.04□□□□□ -0.32
CHKA-206ENST00000531341 REG3GQ6UW15 175 aa13.04□□□□□ -0.32
CHKA-206ENST00000531341 FER1L6-AS1Q8NA97 138 aa13.03□□□□□ -0.32
CHKA-206ENST00000531341 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
CHKA-206ENST00000531341 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
CHKA-206ENST00000531341 NIT2Q9NQR4 276 aa13.03□□□□□ -0.32
CHKA-206ENST00000531341 GVQW2A0A096LPI5 108 aaPredicted RBP13.02□□□□□ -0.33
CHKA-206ENST00000531341 CHCHD10Q8WYQ3 142 aaPredicted RBP13.02□□□□□ -0.33
CHKA-206ENST00000531341 RPL35P42766 123 aaKnown RBP13.01□□□□□ -0.33
CHKA-206ENST00000531341 COTL1Q14019 142 aa13.01□□□□□ -0.33
CHKA-206ENST00000531341 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
CHKA-206ENST00000531341 ARPC5O15511 151 aa13□□□□□ -0.33
CHKA-206ENST00000531341 PFDN1O60925 122 aa13□□□□□ -0.33
CHKA-206ENST00000531341 OR2D3Q8NGH3 330 aa13□□□□□ -0.33
CHKA-206ENST00000531341 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
CHKA-206ENST00000531341 FOXI1Q12951 378 aa12.99□□□□□ -0.33
CHKA-206ENST00000531341 C19orf71A6NCJ1 209 aa12.98□□□□□ -0.33
CHKA-206ENST00000531341 CACNG7P62955 275 aa12.98□□□□□ -0.33
CHKA-206ENST00000531341 Q6ZRP5 223 aa12.98□□□□□ -0.33
CHKA-206ENST00000531341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.97□□□□□ -0.33
CHKA-206ENST00000531341 IGKV2-29A2NJV5 120 aaPredicted RBP12.97□□□□□ -0.33
CHKA-206ENST00000531341 NTF3P20783 257 aa12.97□□□□□ -0.33
CHKA-206ENST00000531341 LYZL1Q6UWQ5 148 aa12.97□□□□□ -0.33
CHKA-206ENST00000531341 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
CHKA-206ENST00000531341 Q6ZNX1 250 aa12.96□□□□□ -0.33
CHKA-206ENST00000531341 TRAV26-2A0A0B4J265 109 aa12.95□□□□□ -0.34
CHKA-206ENST00000531341 CENPWQ5EE01 88 aa12.95□□□□□ -0.34
CHKA-206ENST00000531341 GATD1Q8NB37 220 aa12.95□□□□□ -0.34
CHKA-206ENST00000531341 RPS20P60866 119 aaKnown RBP12.94□□□□□ -0.34
CHKA-206ENST00000531341 CCL20P78556 96 aa12.94□□□□□ -0.34
CHKA-206ENST00000531341 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
CHKA-206ENST00000531341 LINC00474Q9P2X8 69 aa12.94□□□□□ -0.34
CHKA-206ENST00000531341 RAB19A4D1S5 217 aa12.93□□□□□ -0.34
CHKA-206ENST00000531341 SMLR1H3BR10 107 aa12.93□□□□□ -0.34
CHKA-206ENST00000531341 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
CHKA-206ENST00000531341 XCL1P47992 114 aa12.93□□□□□ -0.34
CHKA-206ENST00000531341 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
CHKA-206ENST00000531341 F2Z2F3 143 aa12.92□□□□□ -0.34
CHKA-206ENST00000531341 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
CHKA-206ENST00000531341 RPL39LQ96EH5 51 aaKnown RBP12.92□□□□□ -0.34
CHKA-206ENST00000531341 H2AFB1P0C5Y9 115 aa12.91□□□□□ -0.34
CHKA-206ENST00000531341 FGF6P10767 208 aa12.91□□□□□ -0.34
CHKA-206ENST00000531341 CARD19Q96LW7 228 aa12.91□□□□□ -0.34
CHKA-206ENST00000531341 A0A1W2PNN7 141 aa12.9□□□□□ -0.34
CHKA-206ENST00000531341 UMAD1C9J7I0 102 aa12.9□□□□□ -0.34
CHKA-206ENST00000531341 C9orf62Q8N4C0 152 aa12.9□□□□□ -0.34
CHKA-206ENST00000531341 CCL25O15444 150 aa12.89□□□□□ -0.35
CHKA-206ENST00000531341 IFNA1P01562 189 aa12.89□□□□□ -0.35
CHKA-206ENST00000531341 OR5A1Q8NGJ0 315 aa12.89□□□□□ -0.35
CHKA-206ENST00000531341 IGHV1-58A0A0C4DH39 117 aa12.88□□□□□ -0.35
CHKA-206ENST00000531341 LINC00959A0A1B0GUT2 108 aa12.88□□□□□ -0.35
CHKA-206ENST00000531341 PTTG1IPP53801 180 aa12.88□□□□□ -0.35
CHKA-206ENST00000531341 FOXA3P55318 350 aaPredicted RBP12.88□□□□□ -0.35
CHKA-206ENST00000531341 GNG13Q9P2W3 67 aa12.88□□□□□ -0.35
CHKA-206ENST00000531341 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
CHKA-206ENST00000531341 SYCNQ0VAF6 134 aa12.87□□□□□ -0.35
CHKA-206ENST00000531341 TWIST1Q15672 202 aa12.87□□□□□ -0.35
CHKA-206ENST00000531341 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 H7C423 109 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 NCR2O95944 276 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 APCSP02743 223 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 CTRLP40313 264 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 PSORS1C2Q9UIG4 136 aa12.86□□□□□ -0.35
CHKA-206ENST00000531341 GNG4P50150 75 aa12.85□□□□□ -0.35
CHKA-206ENST00000531341 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
CHKA-206ENST00000531341 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
CHKA-206ENST00000531341 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
CHKA-206ENST00000531341 MANBALQ9NQG1 85 aa12.84□□□□□ -0.35
CHKA-206ENST00000531341 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
CHKA-206ENST00000531341 PRR26Q8N8Z3 221 aa12.83□□□□□ -0.36
CHKA-206ENST00000531341 PKIGQ9Y2B9 76 aa12.83□□□□□ -0.36
CHKA-206ENST00000531341 ZNF561-AS1K7EIQ3 104 aa12.82□□□□□ -0.36
CHKA-206ENST00000531341 BCL2P10415 239 aa12.82□□□□□ -0.36
CHKA-206ENST00000531341 ZNF25P17030 456 aaPredicted RBP12.82□□□□□ -0.36
CHKA-206ENST00000531341 SMIM12Q96EX1 92 aa12.82□□□□□ -0.36
CHKA-206ENST00000531341 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
CHKA-206ENST00000531341 CAMPP49913 170 aa12.81□□□□□ -0.36
CHKA-206ENST00000531341 ZNF345Q14585 488 aa12.81□□□□□ -0.36
CHKA-206ENST00000531341 LOC107984640A0A0U1RRK4 108 aa12.8□□□□□ -0.36
CHKA-206ENST00000531341 ESDP10768 282 aa12.8□□□□□ -0.36
CHKA-206ENST00000531341 CD164L2Q6UWJ8 174 aa12.8□□□□□ -0.36
CHKA-206ENST00000531341 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
CHKA-206ENST00000531341 TMEM101Q96IK0 257 aa12.8□□□□□ -0.36
CHKA-206ENST00000531341 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
CHKA-206ENST00000531341 MT-ND6P03923 174 aa12.79□□□□□ -0.36
CHKA-206ENST00000531341 PMCHP20382 165 aa12.79□□□□□ -0.36
CHKA-206ENST00000531341 C9orf116Q5BN46 136 aaPredicted RBP12.79□□□□□ -0.36
CHKA-206ENST00000531341 C1orf137Q5JT78 98 aa12.79□□□□□ -0.36
CHKA-206ENST00000531341 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
CHKA-206ENST00000531341 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
CHKA-206ENST00000531341 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
CHKA-206ENST00000531341 I3L3M4 83 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 BCL2L11O43521 198 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms