RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 NUPR1O60356 82 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 LEPROTL1O95214 131 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-228ENST00000531007 SH2D6Q7Z4S9 175 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 SLC25A29Q8N8R3 303 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 NEXN-AS1Q8NBZ9 246 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
CTNND1-228ENST00000531007 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 ATP5LO75964 103 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 NUDT3O95989 172 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 NPSP0C0P6 89 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 DEFA6Q01524 100 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 SMAGPQ0VAQ4 97 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 Q6ZSN1 163 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
CTNND1-228ENST00000531007 H3BNG1 76 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 CRYBA4P53673 196 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 COTL1Q14019 142 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 FAM19A2Q8N3H0 131 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 MRAPQ8TCY5 172 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 GTSF1LQ9H1H1 148 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 CYSLTR1Q9Y271 337 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 NACAE9PAV3 2078 aa6.96□□□□□ -1.3
CTNND1-228ENST00000531007 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
CTNND1-228ENST00000531007 UBE2D3P61077 147 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 UBE2D2P62837 147 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 ZNRF2Q8NHG8 242 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
CTNND1-228ENST00000531007 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 C20orf202A1L168 122 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 H7C423 109 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 DEFB4AO15263 64 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 TSHBP01222 138 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 PRB2P02812 416 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-228ENST00000531007 JOSD1Q15040 202 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-228ENST00000531007 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 ERASQ7Z444 233 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 C11orf45Q8TAV5 145 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
CTNND1-228ENST00000531007 A0A096LNJ9 63 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-228ENST00000531007 P0DMU3 169 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 FAM231AP0DMU4 169 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 FAM231CP0DMU5 169 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 LINC00694P0DN24 101 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 C12orf74Q32Q52 190 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 RETNQ9HD89 108 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
CTNND1-228ENST00000531007 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 F5H768 121 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 SYS1-DBNDD2H3BUS1 97 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 PLA2G1BP04054 148 aaKnown RBP6.92□□□□□ -1.3
CTNND1-228ENST00000531007 GAGE1Q13065 139 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 GAGE4Q13068 117 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 GAGE5Q13069 117 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
CTNND1-228ENST00000531007 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 NBEAL2Q6ZNJ1 2754 aa6.92□□□□□ -1.3
CTNND1-228ENST00000531007 C3orf79P0CE67 100 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 GYPEP15421 78 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 KRTDAPP60985 99 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 PKIAP61925 76 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 Q6ZN92 141 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 TGP01266 2768 aa6.91□□□□□ -1.3
CTNND1-228ENST00000531007 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 TIRAPP58753 221 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
CTNND1-228ENST00000531007 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.3
CTNND1-228ENST00000531007 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 IGIPA6NJ69 53 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 SCGB1D1O95968 90 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-228ENST00000531007 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 LGALS9CQ6DKI2 356 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 MRPL52Q86TS9 123 aaKnown RBP6.89□□□□□ -1.31
CTNND1-228ENST00000531007 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-228ENST00000531007 TMEM243Q9BU79 118 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 CHCHD7Q9BUK0 85 aa6.89□□□□□ -1.31
CTNND1-228ENST00000531007 Q9UF83 564 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms