RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 WFDC2Q14508 124 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 Q6ZSA8 131 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 TMEM75Q8N9X5 138 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 C5orf17Q8NAS9 161 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
CSDE1-213ENST00000530784 A8MWV9 139 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 GGTLC3B5MD39 225 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 INMT-MINDY4F8WBC2 141 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 HMGB3O15347 200 aaKnown RBP4.17□□□□□ -1.74
CSDE1-213ENST00000530784 SSNA1O43805 119 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 ARL14EPLP0DKL9 152 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 ZNF80P51504 273 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-213ENST00000530784 FLI1Q01543 452 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-213ENST00000530784 SMUG1Q53HV7 270 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 OR10G9Q8NGN4 311 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 PTH2Q96A98 100 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
CSDE1-213ENST00000530784 A0A087WWC5 75 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 RBFOX3A6NFN3 312 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 SEC11BP0C7V7 166 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 LINC00694P0DN24 101 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 RNASE3P12724 160 aaKnown RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 S100A4P26447 101 aaKnown RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 CDC34P49427 236 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 SAPCD1Q5SSQ6 148 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 ZFP2Q6ZN57 461 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 SCXQ7RTU7 201 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 DAZ4Q86SG3 579 aaKnown RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 PRNTQ86SH4 94 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 CYB561D1Q8N8Q1 229 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 BAALCQ8WXS3 180 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 RMI2Q96E14 147 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 WFDC1Q9HC57 220 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 DAZ3Q9NR90 486 aaKnown RBP4.16□□□□□ -1.74
CSDE1-213ENST00000530784 URGCP-MRPS24S4R325 110 aa4.16□□□□□ -1.74
CSDE1-213ENST00000530784 STAG3L2P0CL84 134 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 STAG3L3P0CL85 134 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 GCHFRP30047 84 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 ASIPP42127 132 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 FGF8P55075 233 aaPredicted RBP4.15□□□□□ -1.75
CSDE1-213ENST00000530784 Q8N976 141 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 HSD17B11Q8NBQ5 300 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 OR2T35Q8NGX2 323 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 EPDR1Q9UM22 224 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 ALG5Q9Y673 324 aa4.15□□□□□ -1.75
CSDE1-213ENST00000530784 IGKV2D-24A0A075B6R9 120 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 H3BVH4 76 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 PFDN1O60925 122 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 CXorf1O96002 111 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 MBP02144 154 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 FAM74A4Q5TZK3 123 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 KCNIP4Q6PIL6 250 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 OR2G3Q8NGZ4 309 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 SUN5Q8TC36 379 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 PGLYRP4Q96LB8 373 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-213ENST00000530784 CHAC1Q9BUX1 264 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 SAMD10Q9BYL1 202 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 TMEM167BQ9NRX6 74 aa4.14□□□□□ -1.75
CSDE1-213ENST00000530784 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 A0A087WX48 190 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 B4DEV8 164 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 ATP6V0CP27449 155 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 ELOBQ15370 118 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 Q86TA4 180 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 AKAP14Q86UN6 197 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 NIT1Q86X76 327 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 TCTE3Q8IZS6 198 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 UBE2WQ96B02 151 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 CHCHD7Q9BUK0 85 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 ACTR3CQ9C0K3 210 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-213ENST00000530784 IL36BQ9NZH7 164 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 ARL2-SNX15V9GYD0 113 aa4.13□□□□□ -1.75
CSDE1-213ENST00000530784 FLG2Q5D862 2391 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-213ENST00000530784 A0A1W2PRE2 83 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 M0R036 132 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 PEX7O00628 323 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 OXTP01178 125 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 IFNA7P01567 189 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 IGLV2-8P01709 118 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 ARMS2P0C7Q2 107 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-213ENST00000530784 SERF2P84101 59 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 C20orf203Q8NBC4 194 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 DNAJC30Q96LL9 226 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 AQP10Q96PS8 301 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 TPPP3Q9BW30 176 aa4.12□□□□□ -1.75
CSDE1-213ENST00000530784 TRBV10-1A0A0K0K1A3 114 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 KRBOX1C9JBD0 128 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 M0R381 172 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 SH2D1AO60880 128 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 CRPP02741 224 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms