RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 HBBP68871 147 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
USH1C-208ENST00000529563 NEXN-AS1Q8NBZ9 246 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 RMI2Q96E14 147 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 TMEM191AQ9H0A3 160 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 RPS10P5Q9NQ39 176 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
USH1C-208ENST00000529563 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
USH1C-208ENST00000529563 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 PPP1R17O96001 155 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 ATP5L2Q7Z4Y8 100 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 BTF3L4Q96K17 158 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
USH1C-208ENST00000529563 FAT1Q14517 4588 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 A0A087WX48 190 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 TRAV26-2A0A0B4J265 109 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 M0QY20 66 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 SNAPINO95295 136 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 ADCYAP1P18509 176 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 UBE2D3P61077 147 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 UBE2D2P62837 147 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 RHEBQ15382 184 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 AMN1Q8IY45 258 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 SVBPQ8N300 66 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 MRAP2Q96G30 205 aa8.07□□□□□ -1.12
USH1C-208ENST00000529563 CKS2P33552 79 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 PKIAP61925 76 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 COTL1Q14019 142 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 Q8N3U1 123 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
USH1C-208ENST00000529563 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
USH1C-208ENST00000529563 TRBV25-1A0A075B6N4 114 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 IGKV2D-24A0A075B6R9 120 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 C7orf77A4D0Y5 90 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 UBE2L6O14933 153 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 PMCHP20382 165 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 DEFB104AQ8WTQ1 72 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 Q9UF83 564 aa8.05□□□□□ -1.12
USH1C-208ENST00000529563 TRBV6-8A0A0A6YYG3 113 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 IGHV1-24A0A0C4DH33 117 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 RAB4AP20338 218 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 WFDC2Q14508 124 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 ELOBQ15370 118 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 Q8N976 141 aa8.04□□□□□ -1.12
USH1C-208ENST00000529563 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 LINC00694P0DN24 101 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 FCER1GP30273 86 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 AMTP48728 403 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 LINC01620Q4KN68 170 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 C10orf91Q5T1B1 145 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
USH1C-208ENST00000529563 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 KLK12Q9UKR0 248 aa8.03□□□□□ -1.12
USH1C-208ENST00000529563 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
USH1C-208ENST00000529563 NCR2O95944 276 aa8.02□□□□□ -1.13
USH1C-208ENST00000529563 PPBPP02775 128 aa8.02□□□□□ -1.13
USH1C-208ENST00000529563 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
USH1C-208ENST00000529563 TMEM243Q9BU79 118 aa8.02□□□□□ -1.13
USH1C-208ENST00000529563 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 I3L3M4 83 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 APCSP02743 223 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 MRPL51Q4U2R6 128 aaKnown RBP8.01□□□□□ -1.13
USH1C-208ENST00000529563 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 KIR2DL4Q99706 377 aa8.01□□□□□ -1.13
USH1C-208ENST00000529563 A0A1B0GXF2 115 aa8□□□□□ -1.13
USH1C-208ENST00000529563 VCYO14598 125 aa8□□□□□ -1.13
USH1C-208ENST00000529563 CRPP02741 224 aa8□□□□□ -1.13
USH1C-208ENST00000529563 GAGE6Q13070 117 aa8□□□□□ -1.13
USH1C-208ENST00000529563 COX19Q49B96 90 aa8□□□□□ -1.13
USH1C-208ENST00000529563 TMEM136Q6ZRR5 245 aa8□□□□□ -1.13
USH1C-208ENST00000529563 Q6ZSA8 131 aa8□□□□□ -1.13
USH1C-208ENST00000529563 SCXQ7RTU7 201 aa8□□□□□ -1.13
USH1C-208ENST00000529563 NIT1Q86X76 327 aa8□□□□□ -1.13
USH1C-208ENST00000529563 ORMDL3Q8N138 153 aa8□□□□□ -1.13
USH1C-208ENST00000529563 RNF185Q96GF1 192 aa8□□□□□ -1.13
USH1C-208ENST00000529563 CHCHD7Q9BUK0 85 aa8□□□□□ -1.13
USH1C-208ENST00000529563 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
USH1C-208ENST00000529563 D6R8Y8 96 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
USH1C-208ENST00000529563 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
USH1C-208ENST00000529563 SMAGPQ0VAQ4 97 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 Q0VG73 95 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 C1orf43Q9BWL3 253 aa7.99□□□□□ -1.13
USH1C-208ENST00000529563 TCAPO15273 167 aa7.98□□□□□ -1.13
USH1C-208ENST00000529563 HLA-DQA1P01909 254 aa7.98□□□□□ -1.13
USH1C-208ENST00000529563 RAB5AP20339 215 aa7.98□□□□□ -1.13
USH1C-208ENST00000529563 IQCJQ1A5X6 159 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms