RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	ZNF861P	O60384	105 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	XCL1	P47992	114 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	PYDC2	Q56P42	97 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372		Q86TA4	180 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	PGLYRP4	Q96LB8	373 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	KRTAP4-12	Q9BQ66	201 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	RBM38	Q9H0Z9	239 aa	Known RBP	6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372		V9GYH0	126 aa		6.67	□□□□□ -1.34
PSMD13-209	ENST00000529372	ZNF561-AS1	K7EIQ3	104 aa		6.66	□□□□□ -1.34
PSMD13-209	ENST00000529372	ARL14EPL	P0DKL9	152 aa		6.66	□□□□□ -1.34
PSMD13-209	ENST00000529372	SUMO1	P63165	101 aa	Known RBP	6.66	□□□□□ -1.34
PSMD13-209	ENST00000529372	RPL18A	Q02543	176 aa	Known RBP	6.66	□□□□□ -1.34
PSMD13-209	ENST00000529372	TSHB	P01222	138 aa		6.65	□□□□□ -1.34
PSMD13-209	ENST00000529372	BTC	P35070	178 aa		6.65	□□□□□ -1.34
PSMD13-209	ENST00000529372	SEC61B	P60468	96 aa	Known RBP	6.65	□□□□□ -1.34
PSMD13-209	ENST00000529372	RNF151	Q2KHN1	245 aa		6.65	□□□□□ -1.34
PSMD13-209	ENST00000529372	TSKU	Q8WUA8	353 aa		6.65	□□□□□ -1.34
PSMD13-209	ENST00000529372	MUC21	A0A140T8X8	626 aa		6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	UBE2L6	O14933	153 aa		6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	CCL25	O15444	150 aa		6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	NKX2-5	P52952	324 aa	Predicted RBP	6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	EIF5AL1	Q6IS14	154 aa	Known RBP	6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	LINC00304	Q8N9R0	145 aa		6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	OR5A1	Q8NGJ0	315 aa		6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	OPRPN	Q99935	248 aa	Predicted RBP	6.64	□□□□□ -1.35
PSMD13-209	ENST00000529372	SNAI2	O43623	268 aa		6.63	□□□□□ -1.35
PSMD13-209	ENST00000529372	ISOC2	Q96AB3	205 aa		6.63	□□□□□ -1.35
PSMD13-209	ENST00000529372	ANAPC11	Q9NYG5	84 aa		6.63	□□□□□ -1.35
PSMD13-209	ENST00000529372	LINC00959	A0A1B0GUT2	108 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372		H3BMQ9	156 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	STAG3L2	P0CL84	134 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	STAG3L3	P0CL85	134 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	DEFA3	P59666	94 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	SUMO4	Q6EEV6	95 aa		6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.62	□□□□□ -1.35
PSMD13-209	ENST00000529372	GCHFR	P30047	84 aa		6.61	□□□□□ -1.35
PSMD13-209	ENST00000529372	LINC00242	Q5T6M2	205 aa		6.61	□□□□□ -1.35
PSMD13-209	ENST00000529372	CAMK2N2	Q96S95	79 aa		6.61	□□□□□ -1.35
PSMD13-209	ENST00000529372		A0A1W2PPV4	95 aa		6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372		H0YIZ8	118 aa		6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372	BCL2L11	O43521	198 aa		6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372	NOL3	O60936	208 aa	Known RBP	6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372	LINC00337	Q8N6G1	96 aa		6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372	C2orf48	Q96LS8	159 aa		6.6	□□□□□ -1.35
PSMD13-209	ENST00000529372	NAP1L6	A6NFF2	107 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372		M0QXV9	152 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	OR5AL1	P0C617	328 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	ESD	P10768	282 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	CTAG1A	P78358	180 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	COTL1	Q14019	142 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	CD164L2	Q6UWJ8	174 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	WFDC1	Q9HC57	220 aa		6.59	□□□□□ -1.35
PSMD13-209	ENST00000529372	NEB	P20929	6669 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	C19orf71	A6NCJ1	209 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	CXCL1	P09341	107 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	UBE2B	P63146	152 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	AP1S3	Q96PC3	154 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	SEC22C	Q9BRL7	303 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	ZFP30	Q9Y2G7	519 aa		6.58	□□□□□ -1.36
PSMD13-209	ENST00000529372	PEX7	O00628	323 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	S100A5	P33763	92 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	SST	P61278	116 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	SS18	Q15532	418 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	SPANXN1	Q5VSR9	72 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	AMMECR1L	Q6DCA0	310 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	RNASEK	Q6P5S7	137 aa	Known RBP	6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	RASL11A	Q6T310	242 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372		Q6ZNX1	250 aa		6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	FP248	Q71RG6	208 aa	Predicted RBP	6.57	□□□□□ -1.36
PSMD13-209	ENST00000529372	CCDC160	A6NGH7	325 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	SMIM17	P0DL12	118 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	NTF3	P20783	257 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	CDC34	P49427	236 aa	Predicted RBP	6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	KRTAP19-1	Q8IUB9	90 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	RAB24	Q969Q5	203 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372	NIT2	Q9NQR4	276 aa		6.56	□□□□□ -1.36
PSMD13-209	ENST00000529372		A0A1W2PRE2	83 aa		6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372		A6NHS1	94 aa		6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372	MGP	P08493	103 aa		6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372	TLX1NB	P0CAT3	122 aa		6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372	TRIQK	Q629K1	86 aa		6.55	□□□□□ -1.36
PSMD13-209	ENST00000529372		H7C423	109 aa		6.54	□□□□□ -1.36
PSMD13-209	ENST00000529372	LTA	P01374	205 aa		6.54	□□□□□ -1.36
PSMD13-209	ENST00000529372	TMEM167B	Q9NRX6	74 aa		6.54	□□□□□ -1.36
PSMD13-209	ENST00000529372	MRPL35	Q9NZE8	188 aa	Known RBP	6.54	□□□□□ -1.36
PSMD13-209	ENST00000529372	C10orf25	Q5T742	122 aa		6.53	□□□□□ -1.36
PSMD13-209	ENST00000529372	SCGB1C1	Q8TD33	95 aa		6.53	□□□□□ -1.36
PSMD13-209	ENST00000529372	SMIM3	Q9BZL3	60 aa		6.53	□□□□□ -1.36
PSMD13-209	ENST00000529372	CTDSP1	Q9GZU7	261 aa		6.53	□□□□□ -1.36
PSMD13-209	ENST00000529372	HSPB11	Q9Y547	144 aa		6.53	□□□□□ -1.36
PSMD13-209	ENST00000529372		G3V3Q6	166 aa		6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372		M0R2T5	61 aa		6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372	COX7A2L	O14548	114 aa		6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372	ZNF25	P17030	456 aa	Predicted RBP	6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372	FAM229B	Q4G0N7	80 aa		6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372	HIST1H2BA	Q96A08	127 aa		6.52	□□□□□ -1.37
PSMD13-209	ENST00000529372	SMDT1	Q9H4I9	107 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms