RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 I3L3M4 83 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 J3QQQ9 107 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 APOMO95445 188 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
TM9SF1-208ENST00000529332 CUBNO60494 3623 aa11.52□□□□□ -0.56
TM9SF1-208ENST00000529332 NDUFA11Q86Y39 141 aa11.52□□□□□ -0.57
TM9SF1-208ENST00000529332 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 PRM2P04554 102 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 HTN1P15515 57 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 SETXQ7Z333 2677 aaKnown RBP11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 IGLV4-3A0A075B6K6 122 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 CCL24O00175 119 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 DEFB131AP59861 70 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 F8P00451 2351 aa11.51□□□□□ -0.57
TM9SF1-208ENST00000529332 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 CFC1P0CG37 223 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 ZNF22P17026 224 aaPredicted RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 LGALS3P17931 250 aaKnown RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 UBE2D3P61077 147 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 UBE2D2P62837 147 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 FHL3Q13643 280 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 INSL3P51460 131 aa11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
TM9SF1-208ENST00000529332 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 LEPROTO15243 131 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 CFAP126Q5VTH2 177 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
TM9SF1-208ENST00000529332 IGHV3-64A0A075B6Q5 118 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 H3BMM0 161 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 RHODO00212 210 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 A8MTW9 85 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 PSMB2P49721 201 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 VCX2Q9H322 139 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 Q9UF83 564 aa11.48□□□□□ -0.57
TM9SF1-208ENST00000529332 CYSRT1A8MQ03 144 aa11.47□□□□□ -0.57
TM9SF1-208ENST00000529332 J3QR89 54 aa11.47□□□□□ -0.57
TM9SF1-208ENST00000529332 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
TM9SF1-208ENST00000529332 NACAE9PAV3 2078 aa11.47□□□□□ -0.57
TM9SF1-208ENST00000529332 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
TM9SF1-208ENST00000529332 TMEM238C9JI98 176 aa11.46□□□□□ -0.57
TM9SF1-208ENST00000529332 Q6ZSN1 163 aa11.46□□□□□ -0.57
TM9SF1-208ENST00000529332 TMEM61Q8N0U2 210 aa11.46□□□□□ -0.57
TM9SF1-208ENST00000529332 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-208ENST00000529332 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-208ENST00000529332 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
TM9SF1-208ENST00000529332 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
TM9SF1-208ENST00000529332 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-208ENST00000529332 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 M0R2P5 195 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 TCL1BO95988 128 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 A4D1N5 150 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 AZU1P20160 251 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 SIGMAR1Q99720 223 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 SPATA25Q9BR10 227 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 PRO1854Q9UHT4 67 aa11.44□□□□□ -0.58
TM9SF1-208ENST00000529332 A8MWV9 139 aa11.43□□□□□ -0.58
TM9SF1-208ENST00000529332 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
TM9SF1-208ENST00000529332 TNFRSF18Q9Y5U5 241 aa11.43□□□□□ -0.58
TM9SF1-208ENST00000529332 TRAV2A0A0B4J234 112 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 RNASE13Q5GAN3 156 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 SPXQ9BT56 116 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 MRPS36P82909 103 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 FOXI1Q12951 378 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 C2CD3Q4AC94 2353 aa11.42□□□□□ -0.58
TM9SF1-208ENST00000529332 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 LYRM7Q5U5X0 104 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 MUSTN1Q8IVN3 82 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 PTH2Q96A98 100 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 CHCHD7Q9BUK0 85 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 TMEM263Q8WUH6 116 aaKnown RBP11.41□□□□□ -0.58
TM9SF1-208ENST00000529332 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms