RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
CHD7-208ENST00000528280 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 PHOX2AO14813 284 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 TRGC2P03986 189 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 SSTP61278 116 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 Q8N814 137 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 TPPP3Q9BW30 176 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 KIF25-AS1Q9Y6Z4 181 aa6.41□□□□□ -1.38
CHD7-208ENST00000528280 LRP1BQ9NZR2 4599 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 MUC21A0A0G2JKD1 596 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 MUC21A0A140T8X8 626 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 Q8N976 141 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 NUDT11Q96G61 164 aa6.4□□□□□ -1.38
CHD7-208ENST00000528280 NTF3P20783 257 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 NDUFA6P56556 154 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 HIST3H2BBQ8N257 126 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 LINC00469Q8N7U9 141 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 OCC1Q8TAD7 63 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 FRZBQ92765 325 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 TMEM70Q9BUB7 260 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 OSTCQ9NRP0 149 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 KLK12Q9UKR0 248 aa6.39□□□□□ -1.39
CHD7-208ENST00000528280 TRBV20OR9-2A0A075B6H5 130 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 TRBV25-1A0A075B6N4 114 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 IGKV2D-24A0A075B6R9 120 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 M0QY20 66 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 GZMBP10144 247 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 LBHQ53QV2 105 aaPredicted RBP6.38□□□□□ -1.39
CHD7-208ENST00000528280 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 UBE2WQ96B02 151 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 CHCHD5Q9BSY4 110 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 DPH3P1Q9H4G8 78 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 RPP21Q9H633 154 aaKnown RBP6.38□□□□□ -1.39
CHD7-208ENST00000528280 NIT2Q9NQR4 276 aa6.38□□□□□ -1.39
CHD7-208ENST00000528280 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 IGHV1-24A0A0C4DH33 117 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 A8MWL6 223 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 EPM2AB3EWF7 344 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 CRPP02741 224 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 MT-ND6P03923 174 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 MGPP08493 103 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 XGP55808 180 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 TWIST1Q15672 202 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 FAM231DQ6ZW35 169 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
CHD7-208ENST00000528280 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 ANGP03950 147 aaKnown RBP6.36□□□□□ -1.39
CHD7-208ENST00000528280 FUSP35637 526 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHD7-208ENST00000528280 CTRLP40313 264 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 MIAQ16674 131 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 IQCJQ1A5X6 159 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CHD7-208ENST00000528280 SUMO4Q6EEV6 95 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 Q8N3U1 123 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 CNFNQ9BYD5 112 aa6.36□□□□□ -1.39
CHD7-208ENST00000528280 IFITM10A6NMD0 228 aa6.35□□□□□ -1.39
CHD7-208ENST00000528280 INAFM2P0DMQ5 153 aa6.35□□□□□ -1.39
CHD7-208ENST00000528280 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
CHD7-208ENST00000528280 CT83Q5H943 113 aa6.35□□□□□ -1.39
CHD7-208ENST00000528280 TMEM18Q96B42 140 aa6.35□□□□□ -1.39
CHD7-208ENST00000528280 PGLYRP4Q96LB8 373 aa6.35□□□□□ -1.39
CHD7-208ENST00000528280 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
CHD7-208ENST00000528280 RNASE7Q9H1E1 156 aaKnown RBP6.35□□□□□ -1.39
CHD7-208ENST00000528280 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 FAM231BA6NCW3 169 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 K7EN84 100 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 NTM-AS1Q6ZSK4 140 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 TMEM243Q9BU79 118 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 GNB1LQ9BYB4 327 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 V9GYV3 84 aa6.34□□□□□ -1.39
CHD7-208ENST00000528280 MYCBP2O75592 4640 aa6.34□□□□□ -1.4
CHD7-208ENST00000528280 TRAV8-4A0A0B4J246 113 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 UBE2L6O14933 153 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 ESDP10768 282 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 RBX1P62877 108 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 COTL1Q14019 142 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
CHD7-208ENST00000528280 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 PYY3Q5JQD4 70 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 OR10D4PQ8NGN7 298 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 PRR34Q9NV39 138 aa6.33□□□□□ -1.4
CHD7-208ENST00000528280 SMIM27A0A1W2PRY6 76 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms