RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 STPG4Q8N801 248 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 A0A087WX48 190 aa13.36□□□□□ -0.27
SMPD1-203ENST00000527275 TNFRSF18Q9Y5U5 241 aa13.36□□□□□ -0.27
SMPD1-203ENST00000527275 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 IGKCP01834 107 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 ANKRD39Q53RE8 183 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 PRKDCP78527 4128 aaKnown RBP13.35□□□□□ -0.27
SMPD1-203ENST00000527275 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 TSHBP01222 138 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 RHOHQ15669 191 aa13.35□□□□□ -0.27
SMPD1-203ENST00000527275 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
SMPD1-203ENST00000527275 HUWE1Q7Z6Z7 4374 aaKnown RBP13.34□□□□□ -0.27
SMPD1-203ENST00000527275 DPM2O94777 84 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 SLC25A34Q6PIV7 304 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
SMPD1-203ENST00000527275 NEXN-AS1Q8NBZ9 246 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 Q9UF83 564 aa13.34□□□□□ -0.27
SMPD1-203ENST00000527275 FAM222AQ5U5X8 452 aa13.33□□□□□ -0.28
SMPD1-203ENST00000527275 HHLA3Q9XRX5 114 aa13.33□□□□□ -0.28
SMPD1-203ENST00000527275 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
SMPD1-203ENST00000527275 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 GAGE7O76087 117 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 MRPS16Q9Y3D3 137 aaKnown RBP13.32□□□□□ -0.28
SMPD1-203ENST00000527275 COX8AP10176 69 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 BATFQ16520 125 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 ZNF479Q96JC4 524 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 TP73-AS1Q9UF72 201 aa13.32□□□□□ -0.28
SMPD1-203ENST00000527275 DEFB130BP0DP73 79 aa13.31□□□□□ -0.28
SMPD1-203ENST00000527275 DEFB130AP0DP74 79 aa13.31□□□□□ -0.28
SMPD1-203ENST00000527275 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
SMPD1-203ENST00000527275 F8VRH5 84 aa13.31□□□□□ -0.28
SMPD1-203ENST00000527275 TCTAP57738 103 aa13.31□□□□□ -0.28
SMPD1-203ENST00000527275 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
SMPD1-203ENST00000527275 TRGV2A0A075B6R0 118 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 PLNP26678 52 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 C20orf203Q8NBC4 194 aa13.3□□□□□ -0.28
SMPD1-203ENST00000527275 LYRM9A8MSI8 78 aa13.29□□□□□ -0.28
SMPD1-203ENST00000527275 LINC00612Q8N6U2 182 aa13.29□□□□□ -0.28
SMPD1-203ENST00000527275 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
SMPD1-203ENST00000527275 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
SMPD1-203ENST00000527275 SPART-AS1P0CW21 52 aa13.28□□□□□ -0.28
SMPD1-203ENST00000527275 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-203ENST00000527275 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.28
SMPD1-203ENST00000527275 NMUP48645 174 aa13.27□□□□□ -0.29
SMPD1-203ENST00000527275 FGF6P10767 208 aa13.26□□□□□ -0.29
SMPD1-203ENST00000527275 PMVKQ15126 192 aa13.26□□□□□ -0.29
SMPD1-203ENST00000527275 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
SMPD1-203ENST00000527275 BOD1L2Q8IYS8 172 aa13.25□□□□□ -0.29
SMPD1-203ENST00000527275 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
SMPD1-203ENST00000527275 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-203ENST00000527275 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
SMPD1-203ENST00000527275 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 K7EQD1 137 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 COL5A1-AS1Q5SY13 56 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 IGKV2D-26A0A0A0MRZ7 120 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 TRBV10-1A0A0K0K1A3 114 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 DAD1P61803 113 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 PCP2Q8IVA1 136 aa13.24□□□□□ -0.29
SMPD1-203ENST00000527275 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
SMPD1-203ENST00000527275 TRBV7-3A0A075B6L6 115 aa13.23□□□□□ -0.29
SMPD1-203ENST00000527275 CIDEAO60543 219 aa13.23□□□□□ -0.29
SMPD1-203ENST00000527275 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
SMPD1-203ENST00000527275 OPRPNQ99935 248 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-203ENST00000527275 HINT1P49773 126 aaPredicted RBP13.22□□□□□ -0.29
SMPD1-203ENST00000527275 COTL1Q14019 142 aa13.22□□□□□ -0.29
SMPD1-203ENST00000527275 DLEU1O43261 78 aa13.22□□□□□ -0.29
SMPD1-203ENST00000527275 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
SMPD1-203ENST00000527275 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
SMPD1-203ENST00000527275 CHCHD7Q9BUK0 85 aa13.22□□□□□ -0.29
SMPD1-203ENST00000527275 C2orf91Q6ZV80 131 aa13.21□□□□□ -0.29
SMPD1-203ENST00000527275 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.3
SMPD1-203ENST00000527275 NHLRC4P0CG21 123 aaPredicted RBP13.21□□□□□ -0.3
SMPD1-203ENST00000527275 C12orf74Q32Q52 190 aa13.21□□□□□ -0.3
SMPD1-203ENST00000527275 PYGO1Q9Y3Y4 419 aa13.21□□□□□ -0.3
SMPD1-203ENST00000527275 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
SMPD1-203ENST00000527275 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
SMPD1-203ENST00000527275 IGLV4-3A0A075B6K6 122 aa13.19□□□□□ -0.3
SMPD1-203ENST00000527275 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
SMPD1-203ENST00000527275 FHL2Q14192 279 aa13.19□□□□□ -0.3
SMPD1-203ENST00000527275 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
SMPD1-203ENST00000527275 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
SMPD1-203ENST00000527275 GAGE12JA6NER3 117 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 SIVA1O15304 175 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 GAGE1Q13065 139 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms