RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 NBEAL2Q6ZNJ1 2754 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 A0A096LNJ9 63 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 M0QY20 66 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 HSBP1O75506 76 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 PPP1R17O96001 155 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 MGPP08493 103 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 PMCHP20382 165 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 AMTP48728 403 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 KPRPQ5T749 579 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 ZFP2Q6ZN57 461 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 Q6ZTI0 123 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 Q8N8P6 123 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 RPL39LQ96EH5 51 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 MAP1LC3AQ9H492 121 aa4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-208ENST00000526821 NACAE9PAV3 2078 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 TRGV1A0A0A0MS02 117 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 IGHV1-24A0A0C4DH33 117 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 JOSD1Q15040 202 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 DEFB135Q30KP9 77 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 FAM74A4Q5TZK3 123 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 RNF183Q96D59 192 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 NOP10Q9NPE3 64 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-208ENST00000526821 TRAV4A0A0B4J268 109 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 K7EMI3 77 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 CIDEAO60543 219 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 ZNF56Q15929 161 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 Q8NAQ8 132 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 OR11H2Q8NH07 326 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 TMEM70Q9BUB7 260 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
ATPAF1-208ENST00000526821 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 H7C1H1 209 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 VCYO14598 125 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 MIFP14174 115 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 FCER1GP30273 86 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 LAGE3Q14657 143 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 Q8N976 141 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 OR4C5Q8NGB2 326 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 Q9UF83 564 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
ATPAF1-208ENST00000526821 IGHV4-28A0A0C4DH34 117 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 LYRM9A8MSI8 78 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 DLEU1O43261 78 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 GAGE7O76087 117 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 LEPROTL1O95214 131 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 HBDP02042 147 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 P0DMU3 169 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 FAM231AP0DMU4 169 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 FAM231CP0DMU5 169 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 DNAJC30Q96LL9 226 aa4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-208ENST00000526821 DNAH9Q9NYC9 4486 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 TRBV10-1A0A0K0K1A3 114 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 I3L3M4 83 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 K7EIL1 84 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 M0R143 59 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 TSHBP01222 138 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 EMP1P54849 157 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 RIPPLY3P57055 190 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 FAM222AQ5U5X8 452 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 NEGR1Q7Z3B1 354 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 ZNF664Q8N3J9 261 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 SLC25A29Q8N8R3 303 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 PRO1933Q9H354 126 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 HSPB8Q9UJY1 196 aa4.31□□□□□ -1.72
ATPAF1-208ENST00000526821 TENM3Q9P273 2699 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 SYS1-DBNDD2H3BUS1 97 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 K7EQD1 137 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 LINC00694P0DN24 101 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 KRTDAPP60985 99 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 RHOHQ15669 191 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms