RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
USP35-201ENST00000526425 ZFAND3Q9H8U3 227 aa7.46□□□□□ -1.21
USP35-201ENST00000526425 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.22
USP35-201ENST00000526425 A0A087WWL8 130 aa7.46□□□□□ -1.22
USP35-201ENST00000526425 A0A1B0GX51 115 aa7.46□□□□□ -1.22
USP35-201ENST00000526425 GNRH2O43555 120 aa7.46□□□□□ -1.22
USP35-201ENST00000526425 GAS8-AS1O95177 125 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 M0R2P5 195 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 SNRPD3P62318 126 aaKnown RBP7.45□□□□□ -1.22
USP35-201ENST00000526425 KLK9Q9UKQ9 250 aa7.45□□□□□ -1.22
USP35-201ENST00000526425 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 TRAV21A0A0B4J279 112 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 TAL2Q16559 108 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 NDUFA4O00483 81 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 LGALS1P09382 135 aaKnown RBP7.44□□□□□ -1.22
USP35-201ENST00000526425 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 NDUFA11Q86Y39 141 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 C20orf173Q96LM9 149 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 H7C1H1 209 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
USP35-201ENST00000526425 A6NDX4 124 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 IGHG2P01859 326 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 IGKV3D-7A0A0C4DH55 119 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 CLPSL1A2RUU4 121 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 IGHV7-4-1A0A0J9YVY3 117 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 RHOHQ15669 191 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 Q6Q795 121 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 FAM19A4Q96LR4 140 aa7.43□□□□□ -1.22
USP35-201ENST00000526425 IGHV4-31P0DP07 118 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 OVOL1O14753 267 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 IGKV3D-20A0A0C4DH25 116 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 LGALS9O00182 355 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 SLURP1P55000 103 aa7.42□□□□□ -1.22
USP35-201ENST00000526425 HIST1H4AP62805 103 aaKnown RBP7.42□□□□□ -1.22
USP35-201ENST00000526425 KNCNA6PVL3 124 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 MALP21145 153 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 CLEC2BQ92478 149 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 COX7CP15954 63 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 NF1P21359 2839 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 DEFB131AP59861 70 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 PRR9Q5T870 116 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 TMEM190Q8WZ59 177 aa7.41□□□□□ -1.22
USP35-201ENST00000526425 CFC1BP0CG36 223 aa7.4□□□□□ -1.22
USP35-201ENST00000526425 CFC1P0CG37 223 aa7.4□□□□□ -1.22
USP35-201ENST00000526425 CYSTM1Q9H1C7 97 aa7.4□□□□□ -1.22
USP35-201ENST00000526425 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
USP35-201ENST00000526425 A0A087WW49 117 aa7.4□□□□□ -1.22
USP35-201ENST00000526425 IGHG4P01861 327 aa7.4□□□□□ -1.23
USP35-201ENST00000526425 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.23
USP35-201ENST00000526425 ELANEP08246 267 aa7.39□□□□□ -1.23
USP35-201ENST00000526425 COX6CP09669 75 aa7.39□□□□□ -1.23
USP35-201ENST00000526425 SDIM1Q6ZPB5 146 aa7.39□□□□□ -1.23
USP35-201ENST00000526425 C18orf65Q6ZTR6 163 aa7.39□□□□□ -1.23
USP35-201ENST00000526425 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
USP35-201ENST00000526425 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
USP35-201ENST00000526425 UBE2D3P61077 147 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 UBE2D2P62837 147 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 ITPR2Q14571 2701 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 J3QQQ9 107 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 RBM3P98179 157 aaKnown RBP7.38□□□□□ -1.23
USP35-201ENST00000526425 UBE2E2Q96LR5 201 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 PSMG3-AS1Q96PY0 264 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
USP35-201ENST00000526425 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 OXTP01178 125 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 PRM2P04554 102 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 PLNP26678 52 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 FBN2P35556 2912 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
USP35-201ENST00000526425 A0A087WVE0 104 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 LAGE3Q14657 143 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 PEMTQ9UBM1 199 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 CUBNO60494 3623 aa7.37□□□□□ -1.23
USP35-201ENST00000526425 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
USP35-201ENST00000526425 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 TMEM243Q9BU79 118 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 TRBV6-1A0A0K0K1D8 114 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 C9orf47Q6ZRZ4 202 aa7.36□□□□□ -1.23
USP35-201ENST00000526425 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 F8VRH5 84 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 H3BUA1 57 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 XCL2Q9UBD3 114 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 ZNRF2Q8NHG8 242 aa7.35□□□□□ -1.23
USP35-201ENST00000526425 UNC79Q9P2D8 2635 aa7.34□□□□□ -1.23
USP35-201ENST00000526425 IGHV3-16A0A0C4DH30 117 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms