RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
USH1C-203ENST00000526181 C20orf203Q8NBC4 194 aa8.78□□□□□ -1
USH1C-203ENST00000526181 FRZBQ92765 325 aa8.78□□□□□ -1
USH1C-203ENST00000526181 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
USH1C-203ENST00000526181 FAT1Q14517 4588 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 IGLV10-54A0A075B6I4 117 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 AMTP48728 403 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 REG3AQ06141 175 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 COTL1Q14019 142 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 Q6ZSA8 131 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
USH1C-203ENST00000526181 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
USH1C-203ENST00000526181 TEX261Q6UWH6 196 aa8.76□□□□□ -1.01
USH1C-203ENST00000526181 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
USH1C-203ENST00000526181 RPL23P62829 140 aaKnown RBP8.75□□□□□ -1.01
USH1C-203ENST00000526181 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
USH1C-203ENST00000526181 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
USH1C-203ENST00000526181 V9GYV3 84 aa8.75□□□□□ -1.01
USH1C-203ENST00000526181 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 A0A1B0GUV1 79 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 UBE2L6O14933 153 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 PRSS1P07477 247 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 TMEM241Q24JQ0 296 aa8.74□□□□□ -1.01
USH1C-203ENST00000526181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
USH1C-203ENST00000526181 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
USH1C-203ENST00000526181 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
USH1C-203ENST00000526181 ADIRFQ15847 76 aa8.73□□□□□ -1.01
USH1C-203ENST00000526181 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
USH1C-203ENST00000526181 RNF185Q96GF1 192 aa8.73□□□□□ -1.01
USH1C-203ENST00000526181 FAM231BA6NCW3 169 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
USH1C-203ENST00000526181 FAM74A3Q4VXF1 159 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 SCXQ7RTU7 201 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 AMN1Q8IY45 258 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 NUP35Q8NFH5 326 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 TMEM191AQ9H0A3 160 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 NAT8Q9UHE5 227 aa8.72□□□□□ -1.01
USH1C-203ENST00000526181 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
USH1C-203ENST00000526181 NCR2O95944 276 aa8.71□□□□□ -1.02
USH1C-203ENST00000526181 APCSP02743 223 aa8.71□□□□□ -1.02
USH1C-203ENST00000526181 RAB4AP20338 218 aa8.71□□□□□ -1.02
USH1C-203ENST00000526181 PEA15Q15121 130 aa8.71□□□□□ -1.02
USH1C-203ENST00000526181 TRAV8-4A0A0B4J246 113 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 IGKV3OR2-268A0A0C4DH90 116 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 SMKR1H3BMG3 65 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 I3L3M4 83 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 TSHBP01222 138 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 AMMECR1LQ6DCA0 310 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 NAT8BQ9UHF3 227 aa8.7□□□□□ -1.02
USH1C-203ENST00000526181 FGF6P10767 208 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 PMCHP20382 165 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 RIGQ13278 110 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 RNASEKQ6P5S7 137 aaKnown RBP8.69□□□□□ -1.02
USH1C-203ENST00000526181 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
USH1C-203ENST00000526181 SMIM27A0A1W2PRY6 76 aa8.68□□□□□ -1.02
USH1C-203ENST00000526181 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
USH1C-203ENST00000526181 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
USH1C-203ENST00000526181 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
USH1C-203ENST00000526181 GAGE12HA6NDE8 117 aa8.67□□□□□ -1.02
USH1C-203ENST00000526181 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
USH1C-203ENST00000526181 DGAT2L7PQ6IED9 249 aa8.67□□□□□ -1.02
USH1C-203ENST00000526181 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
USH1C-203ENST00000526181 H7C423 109 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 ESDP10768 282 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 CAMPP49913 170 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 NRACQ8N912 160 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 CLRN3Q8NCR9 226 aa8.66□□□□□ -1.02
USH1C-203ENST00000526181 TRBV27A0A0K0K1C4 114 aa8.65□□□□□ -1.02
USH1C-203ENST00000526181 PANO1I0J062 215 aa8.65□□□□□ -1.02
USH1C-203ENST00000526181 SLPIP03973 132 aa8.65□□□□□ -1.02
USH1C-203ENST00000526181 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
USH1C-203ENST00000526181 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
USH1C-203ENST00000526181 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.02
USH1C-203ENST00000526181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
USH1C-203ENST00000526181 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
USH1C-203ENST00000526181 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
USH1C-203ENST00000526181 FAM104BQ5XKR9 115 aa8.64□□□□□ -1.03
USH1C-203ENST00000526181 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
USH1C-203ENST00000526181 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
USH1C-203ENST00000526181 HIGD2BQ4VC39 106 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 BTF3L4Q96K17 158 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
USH1C-203ENST00000526181 C7orf77A4D0Y5 90 aa8.62□□□□□ -1.03
USH1C-203ENST00000526181 VCYO14598 125 aa8.62□□□□□ -1.03
USH1C-203ENST00000526181 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
USH1C-203ENST00000526181 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
USH1C-203ENST00000526181 FOXI1Q12951 378 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms