RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 TMEM155Q4W5P6 130 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 SERP2Q8N6R1 65 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 SRSF12Q8WXF0 261 aaKnown RBP3.8□□□□□ -1.8
CD44-218ENST00000525469 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 CNFNQ9BYD5 112 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 CALYQ9NYX4 217 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 STAB2Q8WWQ8 2551 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 SPRY2O43597 315 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 ARMS2P0C7Q2 107 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 DEFA4P12838 97 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 ZNF32P17041 273 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 PRDX2P32119 198 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 ZNF138P52744 262 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 MRPL51Q4U2R6 128 aaKnown RBP3.79□□□□□ -1.8
CD44-218ENST00000525469 CD164L2Q6UWJ8 174 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 LINC00305Q7Z4B0 112 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 C11orf53Q8IXP5 236 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 POM121L12Q8N7R1 296 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 DAND5Q8N907 189 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 C9orf85Q96MD7 179 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 METTL26Q96S19 204 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 AGPAT4-IT1Q9H0P7 198 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 JPT2Q9H910 190 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 LINC00527Q9UJ94 153 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 SERP1Q9Y6X1 66 aa3.79□□□□□ -1.8
CD44-218ENST00000525469 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 MUC4Q99102 2169 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 IGLV3-9A0A075B6K5 115 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 IGKV2D-26A0A0A0MRZ7 120 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 A0A0J9YX75 114 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 OOSP1A8MZH6 123 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 C12orf77C9JDV5 145 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 NDUFC1O43677 76 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 IGHV1-46P01743 117 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 HOXD3P31249 432 aaPredicted RBP3.78□□□□□ -1.8
CD44-218ENST00000525469 KRTAP10-11P60412 298 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 SUMO2P61956 95 aaKnown RBP3.78□□□□□ -1.8
CD44-218ENST00000525469 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
CD44-218ENST00000525469 ANXA2RQ3ZCQ2 193 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 FAM201AQ5SY85 155 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 SLC25A29Q8N8R3 303 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 WFDC9Q8NEX5 89 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 ITLN1Q8WWA0 313 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 ZNF524Q96C55 264 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 C18orf15Q96N68 181 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 Q9H3A6 140 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.8
CD44-218ENST00000525469 SELENOKQ9Y6D0 94 aa3.78□□□□□ -1.8
CD44-218ENST00000525469 RBAKDNA6NC62 111 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 UPK2O00526 184 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 ENSAO43768 121 aaKnown RBP3.77□□□□□ -1.81
CD44-218ENST00000525469 IGHV1-69P01742 117 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
CD44-218ENST00000525469 Q1RN00 199 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 TMEM141Q96I45 108 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 MCRIP2Q9BUT9 160 aaKnown RBP3.77□□□□□ -1.81
CD44-218ENST00000525469 SIRPDQ9H106 197 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 GNG12Q9UBI6 72 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 TP53TG1Q9Y2A0 90 aa3.77□□□□□ -1.81
CD44-218ENST00000525469 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 AGRNO00468 2067 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 LOC107984640A0A0U1RRK4 108 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 IGHV3-13P01766 116 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 IGHV3-30P01768 117 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 IGHV3-33P01772 117 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 IGHV3-30-5P0DP03 117 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 CD28P10747 220 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 PFN2P35080 140 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 DLX1P56177 255 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 HOXA4Q00056 320 aaPredicted RBP3.76□□□□□ -1.81
CD44-218ENST00000525469 EGFEM1PQ0D2K5 195 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 FAM222AQ5U5X8 452 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 Q6ZQT7 251 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 PRNTQ86SH4 94 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 SCGB3A1Q96QR1 104 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 LYSTQ99698 3801 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 SLC50A1Q9BRV3 221 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 SHANK2-AS3Q9BTD1 123 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 DCTN5Q9BTE1 182 aa3.76□□□□□ -1.81
CD44-218ENST00000525469 CSMD3Q7Z407 3707 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 TMSB15BA0A087X1C1 80 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 A0A0J9YY99 117 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 hADV29S1A0JD25 119 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 KNCNA6PVL3 124 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 J3QQQ9 107 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms