RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TRAV40A0A0B4J280 105 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 IGHV3-35A0A0C4DH35 117 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 LY6G6EA0A0G2JKS1 128 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 PINLYPA6NC86 204 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 IGLV1-51P01701 117 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 CCL3P10147 92 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 DSCR9P59020 149 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 CSNK1G2-AS1Q8NCQ2 148 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 MYOFQ9NZM1 2061 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 EML5Q05BV3 1969 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 NCOR2Q9Y618 2525 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 PSCAO43653 123 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 TRGV3P03979 118 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 COX6B1P14854 86 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 MOBPQ13875 183 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 Q8N7P7 452 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 CNEP1R1Q8N9A8 125 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 TTTY10Q9BZA0 68 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 GPR179Q6PRD1 2367 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 ZNF292O60281 2723 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 MAST4O15021 2626 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 DSCAML1Q8TD84 2053 aa4.57□□□□□ -1.68
SDC2-208ENST00000523877 ZFHX2Q9C0A1 2572 aaPredicted RBP4.57□□□□□ -1.68
SDC2-208ENST00000523877 ACACBO00763 2458 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 USP24Q9UPU5 2620 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 IGLV3-16A0A075B6K0 115 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 IGHV5-10-1A0A0J9YXX1 117 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 LOC730098B7Z3J9 87 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 K7ERS5 55 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 MSMBP08118 114 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
SDC2-208ENST00000523877 ZFAND2AQ8N6M9 145 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 LINC01560Q8TB33 94 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 FGF23Q9GZV9 251 aaPredicted RBP4.56□□□□□ -1.68
SDC2-208ENST00000523877 FAM208BQ5VWN6 2430 aa4.56□□□□□ -1.68
SDC2-208ENST00000523877 NUP214P35658 2090 aaPredicted RBP4.55□□□□□ -1.68
SDC2-208ENST00000523877 IGHV3-43A0A0B4J1X8 118 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 H7C2G1 150 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 TSHBP01222 138 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 IGHV3-11P01762 117 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 BAALC-AS2P0C853 105 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 ZNF137PP52743 207 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 RPL36AP83881 106 aaKnown RBP4.55□□□□□ -1.68
SDC2-208ENST00000523877 MIAQ16674 131 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 SPANXN5Q5MJ07 72 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 Q8IYB0 196 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 ARHGAP5-AS1Q96IT6 56 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 BBC3Q96PG8 261 aaPredicted RBP4.55□□□□□ -1.68
SDC2-208ENST00000523877 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 DMDP11532 3685 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 HEATR1Q9H583 2144 aaKnown RBP4.55□□□□□ -1.68
SDC2-208ENST00000523877 DMXL1Q9Y485 3027 aa4.55□□□□□ -1.68
SDC2-208ENST00000523877 GVINP1Q7Z2Y8 2422 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 A0A0J9YX75 114 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 LOC101927531A0A1B0GV80 90 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 M0R135 149 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 CRPP02741 224 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 IGHV3-30-3P0DP02 117 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 ARID1AO14497 2285 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
SDC2-208ENST00000523877 ASPMQ8IZT6 3477 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 FASNP49327 2511 aaKnown RBP4.53□□□□□ -1.68
SDC2-208ENST00000523877 CACNA1HO95180 2353 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 SRRM5B3KS81 715 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 NDUFA3O95167 84 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 IGLV2-11P01706 119 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 IAPPP10997 89 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 FXYD4P59646 89 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 IGLV3-21P80748 117 aaPredicted RBP4.53□□□□□ -1.68
SDC2-208ENST00000523877 TFF3Q07654 80 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 C1orf134Q5TEV5 83 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 DSCAMO60469 2012 aa4.53□□□□□ -1.68
SDC2-208ENST00000523877 TPRP12270 2363 aaKnown RBP4.52□□□□□ -1.69
SDC2-208ENST00000523877 TRBV6-6A0A0A6YYG2 114 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 IGKV6D-41A0A0C4DH26 115 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 B4DSR2 109 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 M0R3E3 92 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 HMGN4O00479 90 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 LY6HO94772 140 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 ELOF1P60002 83 aaKnown RBP4.52□□□□□ -1.69
SDC2-208ENST00000523877 NREPQ16612 68 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 OBSCN-AS1Q96MR7 158 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 ZNF580Q9UK33 172 aa4.52□□□□□ -1.69
SDC2-208ENST00000523877 MUC22E2RYF6 1773 aaPredicted RBP4.52□□□□□ -1.69
SDC2-208ENST00000523877 COL5A1P20908 1838 aaPredicted RBP4.51□□□□□ -1.69
SDC2-208ENST00000523877 IGHV3-21A0A0B4J1V1 117 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 A0A1B0GVT2 93 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 ROMO1P60602 79 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 FAM74A4Q5TZK3 123 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms