RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 C1orf158Q8N1D5 194 aa4.83□□□□□ -1.64
SHPRH-210ENST00000523276 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
SHPRH-210ENST00000523276 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
SHPRH-210ENST00000523276 MYO9AB2RTY4 2548 aa4.83□□□□□ -1.64
SHPRH-210ENST00000523276 CUBNO60494 3623 aa4.83□□□□□ -1.64
SHPRH-210ENST00000523276 RS1O15537 224 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 SAP30O75446 220 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
SHPRH-210ENST00000523276 HERVK_113P61574 105 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 Q6ZSN1 163 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 IL17DQ8TAD2 202 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 UNC79Q9P2D8 2635 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 AGRNO00468 2067 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 K7EP13 123 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 IGLV1-51P01701 117 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 IGHV3-53P01767 116 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 SMIM13P0DJ93 91 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 AZU1P20160 251 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 NF1P21359 2839 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 EMP1P54849 157 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 NFE4Q86UQ8 179 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 OR4C5Q8NGB2 326 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 ZNRF2Q8NHG8 242 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
SHPRH-210ENST00000523276 FAM110AQ9BQ89 295 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
SHPRH-210ENST00000523276 IGLV4-3A0A075B6K6 122 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 TRBV7-3A0A075B6L6 115 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 H3BUT2 72 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 SMR3AQ99954 134 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 TLN2Q9Y4G6 2542 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 CCDC168Q8NDH2 2452 aa4.81□□□□□ -1.64
SHPRH-210ENST00000523276 ITPR2Q14571 2701 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 RNASE8Q8TDE3 154 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 PHLDA1Q8WV24 401 aaPredicted RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 RAB37Q96AX2 223 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 Q9UF83 564 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 SONP18583 2426 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 K7ERJ3 54 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 LY6G6DO95868 133 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 GIG44P09565 113 aaPredicted RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 TMEM170BQ5T4T1 132 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 FAM104AQ969W3 186 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 CHCHD7Q9BUK0 85 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 VCX2Q9H322 139 aa4.8□□□□□ -1.64
SHPRH-210ENST00000523276 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
SHPRH-210ENST00000523276 TRGV1A0A0A0MS02 117 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 A0A1W2PPM0 123 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 K7EP34 96 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 CRYBA4P53673 196 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 TSPEAR-AS2P59090 65 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 KRTAP10-3P60369 221 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 NDUFA11Q86Y39 141 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 PLEKHB2Q96CS7 222 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 AMELXQ99217 191 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 WFDC10AQ9H1F0 79 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.64
SHPRH-210ENST00000523276 A0A0J9YXV3 536 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 ZNF22P17026 224 aaPredicted RBP4.79□□□□□ -1.64
SHPRH-210ENST00000523276 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 GTF2H5Q6ZYL4 71 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
SHPRH-210ENST00000523276 TRAV4A0A0B4J268 109 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 A0A1B0GWB2 263 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 B5MCH6 92 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 J3QQQ9 107 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 LEPROTO15243 131 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
SHPRH-210ENST00000523276 COTL1Q14019 142 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 C12orf74Q32Q52 190 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 Q6ZTI0 123 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
SHPRH-210ENST00000523276 SORL1Q92673 2214 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.77□□□□□ -1.65
SHPRH-210ENST00000523276 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 A0A0J9YY99 117 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 IGKV2-29A2NJV5 120 aaPredicted RBP4.77□□□□□ -1.65
SHPRH-210ENST00000523276 FABP2P12104 132 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 MRPS36P82909 103 aaKnown RBP4.77□□□□□ -1.65
SHPRH-210ENST00000523276 DAZ2Q13117 558 aaKnown RBP4.77□□□□□ -1.65
SHPRH-210ENST00000523276 CEMP1Q6PRD7 247 aaPredicted RBP4.77□□□□□ -1.65
SHPRH-210ENST00000523276 C16orf74Q96GX8 76 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 C1QTNF4Q9BXJ3 329 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 TRBV10-1A0A0K0K1A3 114 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 PLAC8L1A1L4L8 177 aa4.77□□□□□ -1.65
SHPRH-210ENST00000523276 IGLL5B9A064 214 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms