RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PRSS1P07477 247 aa12.15□□□□□ -0.46
SPIDR-220ENST00000522900 REG3AQ06141 175 aa12.15□□□□□ -0.46
SPIDR-220ENST00000522900 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
SPIDR-220ENST00000522900 IGLV10-54A0A075B6I4 117 aa12.14□□□□□ -0.47
SPIDR-220ENST00000522900 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
SPIDR-220ENST00000522900 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
SPIDR-220ENST00000522900 A0A1B0GUV1 79 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 A8MWL6 223 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 SRP19P09132 144 aaKnown RBP12.13□□□□□ -0.47
SPIDR-220ENST00000522900 COTL1Q14019 142 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 FAM210AQ96ND0 272 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
SPIDR-220ENST00000522900 AMTP48728 403 aa12.12□□□□□ -0.47
SPIDR-220ENST00000522900 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
SPIDR-220ENST00000522900 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
SPIDR-220ENST00000522900 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
SPIDR-220ENST00000522900 HERC1Q15751 4861 aa12.11□□□□□ -0.47
SPIDR-220ENST00000522900 ZNF727A8MUV8 499 aa12.1□□□□□ -0.47
SPIDR-220ENST00000522900 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
SPIDR-220ENST00000522900 CT83Q5H943 113 aa12.1□□□□□ -0.47
SPIDR-220ENST00000522900 CIRBP-AS1Q8TBR5 109 aa12.1□□□□□ -0.47
SPIDR-220ENST00000522900 UBE2L6O14933 153 aa12.09□□□□□ -0.47
SPIDR-220ENST00000522900 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
SPIDR-220ENST00000522900 TRAV8-4A0A0B4J246 113 aa12.08□□□□□ -0.48
SPIDR-220ENST00000522900 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
SPIDR-220ENST00000522900 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
SPIDR-220ENST00000522900 C9JQL5 133 aa12.07□□□□□ -0.48
SPIDR-220ENST00000522900 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
SPIDR-220ENST00000522900 DGAT2L7PQ6IED9 249 aa12.07□□□□□ -0.48
SPIDR-220ENST00000522900 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
SPIDR-220ENST00000522900 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
SPIDR-220ENST00000522900 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-220ENST00000522900 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-220ENST00000522900 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
SPIDR-220ENST00000522900 TEX261Q6UWH6 196 aa12.06□□□□□ -0.48
SPIDR-220ENST00000522900 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
SPIDR-220ENST00000522900 A0A1B0GUT8 65 aa12.05□□□□□ -0.48
SPIDR-220ENST00000522900 BORCS7Q96B45 105 aa12.05□□□□□ -0.48
SPIDR-220ENST00000522900 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
SPIDR-220ENST00000522900 V9GYV3 84 aa12.05□□□□□ -0.48
SPIDR-220ENST00000522900 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-220ENST00000522900 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
SPIDR-220ENST00000522900 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
SPIDR-220ENST00000522900 NCR2O95944 276 aa12.04□□□□□ -0.48
SPIDR-220ENST00000522900 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
SPIDR-220ENST00000522900 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
SPIDR-220ENST00000522900 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
SPIDR-220ENST00000522900 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 PANO1I0J062 215 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 SLPIP03973 132 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 RAB4AP20338 218 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 PMCHP20382 165 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 KRTAP10-4P60372 401 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-220ENST00000522900 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 SDIM1Q6ZPB5 146 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
SPIDR-220ENST00000522900 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.49
SPIDR-220ENST00000522900 I3L3M4 83 aa12.02□□□□□ -0.49
SPIDR-220ENST00000522900 APCSP02743 223 aa12.02□□□□□ -0.49
SPIDR-220ENST00000522900 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.49
SPIDR-220ENST00000522900 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
SPIDR-220ENST00000522900 AMMECR1LQ6DCA0 310 aa12.02□□□□□ -0.49
SPIDR-220ENST00000522900 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
SPIDR-220ENST00000522900 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
SPIDR-220ENST00000522900 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-220ENST00000522900 TSHBP01222 138 aa12.01□□□□□ -0.49
SPIDR-220ENST00000522900 FGF6P10767 208 aa12.01□□□□□ -0.49
SPIDR-220ENST00000522900 NUP35Q8NFH5 326 aa12.01□□□□□ -0.49
SPIDR-220ENST00000522900 CNBPP62633 177 aaKnown RBP12□□□□□ -0.49
SPIDR-220ENST00000522900 ST20Q9HBF5 79 aa12□□□□□ -0.49
SPIDR-220ENST00000522900 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
SPIDR-220ENST00000522900 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
SPIDR-220ENST00000522900 H7C423 109 aa11.99□□□□□ -0.49
SPIDR-220ENST00000522900 ESDP10768 282 aa11.99□□□□□ -0.49
SPIDR-220ENST00000522900 POLR2KP53803 58 aaKnown RBP11.99□□□□□ -0.49
SPIDR-220ENST00000522900 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
SPIDR-220ENST00000522900 RIGQ13278 110 aa11.98□□□□□ -0.49
SPIDR-220ENST00000522900 ADIRFQ15847 76 aa11.98□□□□□ -0.49
SPIDR-220ENST00000522900 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
SPIDR-220ENST00000522900 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
SPIDR-220ENST00000522900 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-220ENST00000522900 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-220ENST00000522900 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
SPIDR-220ENST00000522900 PEA15Q15121 130 aa11.96□□□□□ -0.49
SPIDR-220ENST00000522900 AP5S1Q9NUS5 200 aa11.96□□□□□ -0.49
SPIDR-220ENST00000522900 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
SPIDR-220ENST00000522900 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-220ENST00000522900 HIGD2BQ4VC39 106 aa11.95□□□□□ -0.5
SPIDR-220ENST00000522900 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
SPIDR-220ENST00000522900 SMIM27A0A1W2PRY6 76 aa11.94□□□□□ -0.5
SPIDR-220ENST00000522900 FOXI1Q12951 378 aa11.94□□□□□ -0.5
SPIDR-220ENST00000522900 NRACQ8N912 160 aa11.94□□□□□ -0.5
SPIDR-220ENST00000522900 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
SPIDR-220ENST00000522900 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
SPIDR-220ENST00000522900 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
SPIDR-220ENST00000522900 J3QL48 77 aa11.93□□□□□ -0.5
SPIDR-220ENST00000522900 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
SPIDR-220ENST00000522900 CFAP161Q6P656 301 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms