RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 GATD1Q8NB37 220 aa11.64□□□□□ -0.55
TOP1MT-215ENST00000522043 TMEM243Q9BU79 118 aa11.64□□□□□ -0.55
TOP1MT-215ENST00000522043 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 A0A1B0GUV1 79 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 PANO1I0J062 215 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 TAGLN2P37802 199 aaKnown RBP11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 FOXA3P55318 350 aaPredicted RBP11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 TWIST1Q15672 202 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 ALKAL2Q6UX46 152 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
TOP1MT-215ENST00000522043 KRTAP29-1A8MX34 341 aaPredicted RBP11.62□□□□□ -0.55
TOP1MT-215ENST00000522043 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
TOP1MT-215ENST00000522043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
TOP1MT-215ENST00000522043 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
TOP1MT-215ENST00000522043 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
TOP1MT-215ENST00000522043 AKAP14Q86UN6 197 aa11.6□□□□□ -0.55
TOP1MT-215ENST00000522043 RPL39LQ96EH5 51 aaKnown RBP11.6□□□□□ -0.55
TOP1MT-215ENST00000522043 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
TOP1MT-215ENST00000522043 J3QL48 77 aa11.59□□□□□ -0.55
TOP1MT-215ENST00000522043 SLPIP03973 132 aa11.59□□□□□ -0.55
TOP1MT-215ENST00000522043 AMTP48728 403 aa11.59□□□□□ -0.55
TOP1MT-215ENST00000522043 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
TOP1MT-215ENST00000522043 COTL1Q14019 142 aa11.58□□□□□ -0.56
TOP1MT-215ENST00000522043 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.56
TOP1MT-215ENST00000522043 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
TOP1MT-215ENST00000522043 BLOC1S1P78537 153 aa11.57□□□□□ -0.56
TOP1MT-215ENST00000522043 CLRN3Q8NCR9 226 aa11.57□□□□□ -0.56
TOP1MT-215ENST00000522043 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
TOP1MT-215ENST00000522043 GAS8-AS1O95177 125 aa11.56□□□□□ -0.56
TOP1MT-215ENST00000522043 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
TOP1MT-215ENST00000522043 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
TOP1MT-215ENST00000522043 UBE2L6O14933 153 aa11.55□□□□□ -0.56
TOP1MT-215ENST00000522043 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
TOP1MT-215ENST00000522043 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
TOP1MT-215ENST00000522043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
TOP1MT-215ENST00000522043 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
TOP1MT-215ENST00000522043 CEBPGP53567 150 aa11.53□□□□□ -0.56
TOP1MT-215ENST00000522043 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
TOP1MT-215ENST00000522043 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 A8MWL6 223 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 CT83Q5H943 113 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 LINC01551Q86U37 167 aa11.52□□□□□ -0.57
TOP1MT-215ENST00000522043 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
TOP1MT-215ENST00000522043 NCR2O95944 276 aa11.51□□□□□ -0.57
TOP1MT-215ENST00000522043 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 APCSP02743 223 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 RNF185Q96GF1 192 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 FAM210AQ96ND0 272 aa11.5□□□□□ -0.57
TOP1MT-215ENST00000522043 HMCN2Q8NDA2 5059 aa11.49□□□□□ -0.57
TOP1MT-215ENST00000522043 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
TOP1MT-215ENST00000522043 FGF6P10767 208 aa11.49□□□□□ -0.57
TOP1MT-215ENST00000522043 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
TOP1MT-215ENST00000522043 TSHBP01222 138 aa11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 ESDP10768 282 aa11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 RPS10P46783 165 aaKnown RBP11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 TEX261Q6UWH6 196 aa11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 EIF5A2Q9GZV4 153 aaKnown RBP11.48□□□□□ -0.57
TOP1MT-215ENST00000522043 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 HIGD1CA8MV81 97 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 H7C423 109 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 I3L3M4 83 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 OXTP01178 125 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
TOP1MT-215ENST00000522043 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 RAB4AP20338 218 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 FOXI1Q12951 378 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 HIGD2BQ4VC39 106 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 TMEM191AQ9H0A3 160 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 V9GYV3 84 aa11.46□□□□□ -0.57
TOP1MT-215ENST00000522043 A0A087WYN8 130 aa11.45□□□□□ -0.58
TOP1MT-215ENST00000522043 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
TOP1MT-215ENST00000522043 PMCHP20382 165 aa11.45□□□□□ -0.58
TOP1MT-215ENST00000522043 POLR2KP53803 58 aaKnown RBP11.45□□□□□ -0.58
TOP1MT-215ENST00000522043 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
TOP1MT-215ENST00000522043 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
TOP1MT-215ENST00000522043 C9JQL5 133 aa11.44□□□□□ -0.58
TOP1MT-215ENST00000522043 OR5A1Q8NGJ0 315 aa11.44□□□□□ -0.58
TOP1MT-215ENST00000522043 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
TOP1MT-215ENST00000522043 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
TOP1MT-215ENST00000522043 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
TOP1MT-215ENST00000522043 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
TOP1MT-215ENST00000522043 ISOC2Q96AB3 205 aa11.43□□□□□ -0.58
TOP1MT-215ENST00000522043 BORCS7Q96B45 105 aa11.43□□□□□ -0.58
TOP1MT-215ENST00000522043 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
TOP1MT-215ENST00000522043 COX6A2Q02221 97 aa11.42□□□□□ -0.58
TOP1MT-215ENST00000522043 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms