RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 NPCDR1Q9BY65 106 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 GNB1LQ9BYB4 327 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM167BQ9NRX6 74 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 FUT9Q9Y231 359 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 ZFP30Q9Y2G7 519 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF257Q9Y2Q1 563 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 KLF12Q9Y4X4 402 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 RBM7Q9Y580 266 aaKnown RBP2.43□□□□□ -2.02
VPS13B-208ENST00000521037 OR51B2Q9Y5P1 312 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 TRAPPC1Q9Y5R8 145 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV3-7A0A075B6H7 116 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 TRBV7-1A0A0A6YYK4 115 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IGHV3-74A0A0B4J1X5 117 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 UBE2L5PA0A1B0GUS4 154 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IGLC7A0M8Q6 106 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 SMIM9A6NGZ8 99 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 KRTAP4-16G5E9R7 235 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 H3BMM0 161 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 H3BP45 60 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 PANO1I0J062 215 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 K7EN84 100 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1-39P01597 117 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IGLV2-8P01709 118 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1D-39P04432 117 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 OR5G3P0C626 314 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 CHTF8P0CG12 524 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IAPPP10997 89 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 CRISP2P16562 243 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 FGF8P55075 233 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 CMC4P56277 68 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 UBE2G2P60604 165 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 RPS20P60866 119 aaKnown RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 RHOBP62745 196 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 RPL18AQ02543 176 aaKnown RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 EIF4EBP1Q13541 118 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-208ENST00000521037 PMCHL1Q16048 86 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 Q1RN00 199 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 GDF5OSQ5U4N7 250 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 OR10W1Q8NGF6 305 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 OR10J6PQ8NGY7 276 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 C7orf33Q8WU49 177 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 GALMQ96C23 342 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM208Q9BTX3 173 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 IL36BQ9NZH7 164 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 UQCR10Q9UDW1 63 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 TRAPPC2LQ9UL33 140 aa2.42□□□□□ -2.02
VPS13B-208ENST00000521037 A0A096LPF7 62 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM189A5PLL7 270 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 OR2T8A6NH00 312 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 K7EIM0 57 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ISLRO14498 428 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF25P17030 456 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-208ENST00000521037 TAS2R45P59539 299 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF90Q03938 601 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 FAM78BQ5VT40 261 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 TCF24Q7RTU0 167 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 MRPL55Q7Z7F7 128 aaKnown RBP2.41□□□□□ -2.02
VPS13B-208ENST00000521037 BAGE3Q86Y29 109 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 BAGE2Q86Y30 109 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 LINC00612Q8N6U2 182 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF738Q8NE65 137 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 SMIM12Q96EX1 92 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 ADTRPQ96IZ2 230 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 SLC35E1Q96K37 410 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 SAMD10Q9BYL1 202 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 COMMD5Q9GZQ3 224 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 NPVFQ9HCQ7 196 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 OSTCQ9NRP0 149 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 RFNGQ9Y644 331 aa2.41□□□□□ -2.02
VPS13B-208ENST00000521037 A0A1W2PRE2 83 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 A8MTW9 85 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 K7EP13 123 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 PEX7O00628 323 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 GPX1P07203 203 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 OR5AL1P0C617 328 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 AZU1P20160 251 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 NPPCP23582 126 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 GCHFRP30047 84 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 GNG4P50150 75 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 RPL37AP61513 92 aaKnown RBP2.4□□□□□ -2.03
VPS13B-208ENST00000521037 POU2AF1Q16633 256 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 HIGD2BQ4VC39 106 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 GCSAMLQ5JQS6 135 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 PSMG4Q5JS54 123 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 SAPCD1Q5SSQ6 148 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 FAM231DQ6ZW35 169 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 ATP5L2Q7Z4Y8 100 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM256Q8N2U0 113 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 OR4S2Q8NH73 311 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 BORCS7Q96B45 105 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 KCNS1Q96KK3 526 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 MRPL32Q9BYC8 188 aaKnown RBP2.4□□□□□ -2.03
VPS13B-208ENST00000521037 OR2D2Q9H210 308 aa2.4□□□□□ -2.03
VPS13B-208ENST00000521037 BET1LQ9NYM9 111 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms