RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 J3QL48 77 aa13.32□□□□□ -0.28
SNHG6-203ENST00000520944 ALKAL2Q6UX46 152 aa13.32□□□□□ -0.28
SNHG6-203ENST00000520944 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 TMEM250H0YL14 139 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 AMTP48728 403 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 KRTAP26-1Q6PEX3 210 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
SNHG6-203ENST00000520944 hCG_2014768A0A024R1R8 64 aa13.3□□□□□ -0.28
SNHG6-203ENST00000520944 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
SNHG6-203ENST00000520944 GATCO43716 136 aaKnown RBP13.29□□□□□ -0.28
SNHG6-203ENST00000520944 CEBPGP53567 150 aa13.29□□□□□ -0.28
SNHG6-203ENST00000520944 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
SNHG6-203ENST00000520944 TRAV26-2A0A0B4J265 109 aa13.28□□□□□ -0.28
SNHG6-203ENST00000520944 C9orf163Q8N9P6 203 aa13.28□□□□□ -0.28
SNHG6-203ENST00000520944 GTSF1Q8WW33 167 aa13.28□□□□□ -0.28
SNHG6-203ENST00000520944 A8MWL6 223 aa13.27□□□□□ -0.29
SNHG6-203ENST00000520944 TEX261Q6UWH6 196 aa13.27□□□□□ -0.29
SNHG6-203ENST00000520944 FAM231DQ6ZW35 169 aa13.26□□□□□ -0.29
SNHG6-203ENST00000520944 LYPD6BQ8NI32 183 aa13.26□□□□□ -0.29
SNHG6-203ENST00000520944 hDV102S1A0JD36 115 aa13.25□□□□□ -0.29
SNHG6-203ENST00000520944 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
SNHG6-203ENST00000520944 EIF5A2Q9GZV4 153 aaKnown RBP13.25□□□□□ -0.29
SNHG6-203ENST00000520944 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
SNHG6-203ENST00000520944 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
SNHG6-203ENST00000520944 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
SNHG6-203ENST00000520944 AP5S1Q9NUS5 200 aa13.24□□□□□ -0.29
SNHG6-203ENST00000520944 NCR2O95944 276 aa13.23□□□□□ -0.29
SNHG6-203ENST00000520944 RPL39LQ96EH5 51 aaKnown RBP13.23□□□□□ -0.29
SNHG6-203ENST00000520944 KRTAP29-1A8MX34 341 aaPredicted RBP13.22□□□□□ -0.29
SNHG6-203ENST00000520944 CNBPP62633 177 aaKnown RBP13.22□□□□□ -0.29
SNHG6-203ENST00000520944 CT83Q5H943 113 aa13.22□□□□□ -0.29
SNHG6-203ENST00000520944 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
SNHG6-203ENST00000520944 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.21□□□□□ -0.29
SNHG6-203ENST00000520944 IGKV3OR2-268A0A0C4DH90 116 aa13.21□□□□□ -0.29
SNHG6-203ENST00000520944 APCSP02743 223 aa13.21□□□□□ -0.29
SNHG6-203ENST00000520944 SDIM1Q6ZPB5 146 aa13.21□□□□□ -0.29
SNHG6-203ENST00000520944 SDHAF1A6NFY7 115 aa13.2□□□□□ -0.3
SNHG6-203ENST00000520944 H7C423 109 aa13.2□□□□□ -0.3
SNHG6-203ENST00000520944 PMCHP20382 165 aa13.2□□□□□ -0.3
SNHG6-203ENST00000520944 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
SNHG6-203ENST00000520944 CFAP161Q6P656 301 aa13.2□□□□□ -0.3
SNHG6-203ENST00000520944 GAGE12HA6NDE8 117 aa13.19□□□□□ -0.3
SNHG6-203ENST00000520944 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
SNHG6-203ENST00000520944 DPH3Q96FX2 82 aa13.19□□□□□ -0.3
SNHG6-203ENST00000520944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.19□□□□□ -0.3
SNHG6-203ENST00000520944 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
SNHG6-203ENST00000520944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.18□□□□□ -0.3
SNHG6-203ENST00000520944 IGKV2-29A2NJV5 120 aaPredicted RBP13.18□□□□□ -0.3
SNHG6-203ENST00000520944 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
SNHG6-203ENST00000520944 I3L3M4 83 aa13.18□□□□□ -0.3
SNHG6-203ENST00000520944 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
SNHG6-203ENST00000520944 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
SNHG6-203ENST00000520944 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
SNHG6-203ENST00000520944 TSKUQ8WUA8 353 aa13.18□□□□□ -0.3
SNHG6-203ENST00000520944 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
SNHG6-203ENST00000520944 HIGD1CA8MV81 97 aa13.17□□□□□ -0.3
SNHG6-203ENST00000520944 FAM210AQ96ND0 272 aa13.17□□□□□ -0.3
SNHG6-203ENST00000520944 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
SNHG6-203ENST00000520944 FGF6P10767 208 aa13.16□□□□□ -0.3
SNHG6-203ENST00000520944 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
SNHG6-203ENST00000520944 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
SNHG6-203ENST00000520944 LRP1Q07954 4544 aaKnown RBP13.15□□□□□ -0.3
SNHG6-203ENST00000520944 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
SNHG6-203ENST00000520944 TMEM101Q96IK0 257 aa13.15□□□□□ -0.3
SNHG6-203ENST00000520944 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
SNHG6-203ENST00000520944 OSTCQ9NRP0 149 aa13.15□□□□□ -0.3
SNHG6-203ENST00000520944 PANO1I0J062 215 aa13.14□□□□□ -0.31
SNHG6-203ENST00000520944 SLPIP03973 132 aa13.14□□□□□ -0.31
SNHG6-203ENST00000520944 ZNF25P17030 456 aaPredicted RBP13.14□□□□□ -0.31
SNHG6-203ENST00000520944 CHCHD10Q8WYQ3 142 aaPredicted RBP13.14□□□□□ -0.31
SNHG6-203ENST00000520944 OXTP01178 125 aa13.13□□□□□ -0.31
SNHG6-203ENST00000520944 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
SNHG6-203ENST00000520944 FAT3Q8TDW7 4589 aa13.12□□□□□ -0.31
SNHG6-203ENST00000520944 C15orf56Q8N910 161 aa13.12□□□□□ -0.31
SNHG6-203ENST00000520944 MRAP2Q96G30 205 aa13.12□□□□□ -0.31
SNHG6-203ENST00000520944 RAB4AP20338 218 aa13.11□□□□□ -0.31
SNHG6-203ENST00000520944 RPS10P46783 165 aaKnown RBP13.11□□□□□ -0.31
SNHG6-203ENST00000520944 RIGQ13278 110 aa13.11□□□□□ -0.31
SNHG6-203ENST00000520944 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
SNHG6-203ENST00000520944 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
SNHG6-203ENST00000520944 RNF185Q96GF1 192 aa13.11□□□□□ -0.31
SNHG6-203ENST00000520944 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 TSHBP01222 138 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 TMEM241Q24JQ0 296 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 HIGD2BQ4VC39 106 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 TMEM242Q9NWH2 141 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 PKHD1L1Q86WI1 4243 aa13.1□□□□□ -0.31
SNHG6-203ENST00000520944 AMN1Q8IY45 258 aa13.09□□□□□ -0.31
SNHG6-203ENST00000520944 ESDP10768 282 aa13.08□□□□□ -0.32
SNHG6-203ENST00000520944 XCL1P47992 114 aa13.08□□□□□ -0.32
SNHG6-203ENST00000520944 POLR2KP53803 58 aaKnown RBP13.08□□□□□ -0.32
SNHG6-203ENST00000520944 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
SNHG6-203ENST00000520944 V9GYV3 84 aa13.08□□□□□ -0.32
SNHG6-203ENST00000520944 A0A087WYN8 130 aa13.07□□□□□ -0.32
SNHG6-203ENST00000520944 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
SNHG6-203ENST00000520944 PPP1R17O96001 155 aa13.07□□□□□ -0.32
SNHG6-203ENST00000520944 CHTF8P0CG12 524 aa13.07□□□□□ -0.32
SNHG6-203ENST00000520944 ISOC2Q96AB3 205 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms