RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
HOXA3-203ENST00000518451 AMTP48728 403 aa12.14□□□□□ -0.47
HOXA3-203ENST00000518451 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
HOXA3-203ENST00000518451 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
HOXA3-203ENST00000518451 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
HOXA3-203ENST00000518451 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
HOXA3-203ENST00000518451 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
HOXA3-203ENST00000518451 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
HOXA3-203ENST00000518451 NCR2O95944 276 aa12.12□□□□□ -0.47
HOXA3-203ENST00000518451 SRP19P09132 144 aaKnown RBP12.12□□□□□ -0.47
HOXA3-203ENST00000518451 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
HOXA3-203ENST00000518451 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
HOXA3-203ENST00000518451 OSTCQ9NRP0 149 aa12.12□□□□□ -0.47
HOXA3-203ENST00000518451 A0A1B0GVG6 124 aa12.11□□□□□ -0.47
HOXA3-203ENST00000518451 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
HOXA3-203ENST00000518451 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
HOXA3-203ENST00000518451 C20orf203Q8NBC4 194 aa12.11□□□□□ -0.47
HOXA3-203ENST00000518451 CLRN3Q8NCR9 226 aa12.11□□□□□ -0.47
HOXA3-203ENST00000518451 A0A1B0GUT8 65 aa12.1□□□□□ -0.47
HOXA3-203ENST00000518451 PLA2G1BP04054 148 aaKnown RBP12.1□□□□□ -0.47
HOXA3-203ENST00000518451 IGLV4-60A0A075B6I1 120 aa12.09□□□□□ -0.47
HOXA3-203ENST00000518451 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
HOXA3-203ENST00000518451 TMEM241Q24JQ0 296 aa12.09□□□□□ -0.47
HOXA3-203ENST00000518451 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
HOXA3-203ENST00000518451 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
HOXA3-203ENST00000518451 IGLV10-54A0A075B6I4 117 aa12.08□□□□□ -0.48
HOXA3-203ENST00000518451 H7C423 109 aa12.08□□□□□ -0.48
HOXA3-203ENST00000518451 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
HOXA3-203ENST00000518451 KRTAP26-1Q6PEX3 210 aa12.08□□□□□ -0.48
HOXA3-203ENST00000518451 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
HOXA3-203ENST00000518451 TMEM191AQ9H0A3 160 aa12.08□□□□□ -0.48
HOXA3-203ENST00000518451 SRRM2Q9UQ35 2752 aaKnown RBP12.08□□□□□ -0.48
HOXA3-203ENST00000518451 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
HOXA3-203ENST00000518451 I3L3M4 83 aa12.07□□□□□ -0.48
HOXA3-203ENST00000518451 APCSP02743 223 aa12.07□□□□□ -0.48
HOXA3-203ENST00000518451 PRSS1P07477 247 aa12.07□□□□□ -0.48
HOXA3-203ENST00000518451 PMCHP20382 165 aa12.07□□□□□ -0.48
HOXA3-203ENST00000518451 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
HOXA3-203ENST00000518451 RIGQ13278 110 aa12.06□□□□□ -0.48
HOXA3-203ENST00000518451 PEA15Q15121 130 aa12.06□□□□□ -0.48
HOXA3-203ENST00000518451 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
HOXA3-203ENST00000518451 SCXQ7RTU7 201 aa12.05□□□□□ -0.48
HOXA3-203ENST00000518451 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
HOXA3-203ENST00000518451 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
HOXA3-203ENST00000518451 ST20Q9HBF5 79 aa12.05□□□□□ -0.48
HOXA3-203ENST00000518451 FAT1Q14517 4588 aa12.05□□□□□ -0.48
HOXA3-203ENST00000518451 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
HOXA3-203ENST00000518451 MRAP2Q96G30 205 aa12.04□□□□□ -0.48
HOXA3-203ENST00000518451 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
HOXA3-203ENST00000518451 PPP1R17O96001 155 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
HOXA3-203ENST00000518451 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 BTF3L4Q96K17 158 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 NAT8Q9UHE5 227 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 V9GYV3 84 aa12.03□□□□□ -0.48
HOXA3-203ENST00000518451 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.02□□□□□ -0.49
HOXA3-203ENST00000518451 hDV102S1A0JD36 115 aa12.02□□□□□ -0.49
HOXA3-203ENST00000518451 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
HOXA3-203ENST00000518451 RAB4AP20338 218 aa12.02□□□□□ -0.49
HOXA3-203ENST00000518451 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
HOXA3-203ENST00000518451 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
HOXA3-203ENST00000518451 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
HOXA3-203ENST00000518451 FGF6P10767 208 aa12.01□□□□□ -0.49
HOXA3-203ENST00000518451 ADIRFQ15847 76 aa12.01□□□□□ -0.49
HOXA3-203ENST00000518451 NUP35Q8NFH5 326 aa12.01□□□□□ -0.49
HOXA3-203ENST00000518451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
HOXA3-203ENST00000518451 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
HOXA3-203ENST00000518451 CNBPP62633 177 aaKnown RBP12□□□□□ -0.49
HOXA3-203ENST00000518451 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
HOXA3-203ENST00000518451 IGKV3OR2-268A0A0C4DH90 116 aa11.99□□□□□ -0.49
HOXA3-203ENST00000518451 POLR2KP53803 58 aaKnown RBP11.99□□□□□ -0.49
HOXA3-203ENST00000518451 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
HOXA3-203ENST00000518451 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
HOXA3-203ENST00000518451 DNAH8Q96JB1 4490 aa11.99□□□□□ -0.49
HOXA3-203ENST00000518451 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
HOXA3-203ENST00000518451 A0A1B0GW15 77 aa11.98□□□□□ -0.49
HOXA3-203ENST00000518451 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
HOXA3-203ENST00000518451 VCYO14598 125 aa11.98□□□□□ -0.49
HOXA3-203ENST00000518451 C9JQL5 133 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 TSHBP01222 138 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 ESDP10768 282 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 SMAGPQ0VAQ4 97 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 OR5A1Q8NGJ0 315 aa11.97□□□□□ -0.49
HOXA3-203ENST00000518451 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.49
HOXA3-203ENST00000518451 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
HOXA3-203ENST00000518451 GAS8-AS1O95177 125 aa11.96□□□□□ -0.49
HOXA3-203ENST00000518451 SRSF3P84103 164 aaKnown RBP11.96□□□□□ -0.49
HOXA3-203ENST00000518451 CHCHD10Q8WYQ3 142 aaPredicted RBP11.96□□□□□ -0.49
HOXA3-203ENST00000518451 TMEM242Q9NWH2 141 aa11.96□□□□□ -0.49
HOXA3-203ENST00000518451 PPP1R2P9O14990 202 aa11.95□□□□□ -0.5
HOXA3-203ENST00000518451 FCER1GP30273 86 aa11.95□□□□□ -0.5
HOXA3-203ENST00000518451 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
HOXA3-203ENST00000518451 C7orf77A4D0Y5 90 aa11.94□□□□□ -0.5
HOXA3-203ENST00000518451 LINC00862A6NCI5 91 aa11.94□□□□□ -0.5
HOXA3-203ENST00000518451 S100A8P05109 93 aa11.94□□□□□ -0.5
HOXA3-203ENST00000518451 FAM104BQ5XKR9 115 aa11.94□□□□□ -0.5
HOXA3-203ENST00000518451 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
HOXA3-203ENST00000518451 DPH3Q96FX2 82 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms