RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 SH2D1AO60880 128 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 RAB32Q13637 225 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 ZNF674Q2M3X9 581 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 WDR61Q9GZS3 305 aaKnown RBP3.28□□□□□ -1.88
LINC00535-202ENST00000517785 KCNIP2Q9NS61 270 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 PKIGQ9Y2B9 76 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 ARL2-SNX15V9GYD0 113 aa3.28□□□□□ -1.88
LINC00535-202ENST00000517785 USH2AO75445 5202 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
LINC00535-202ENST00000517785 A0A087X002 238 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 A0A1B0GUV1 79 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 C17orf112F2Z3M2 114 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 H3BMQ9 156 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 K7EQM0 130 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 NDUFB6O95139 128 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 XCL1P47992 114 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 CRIP1P50238 77 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 TMBIM6P55061 237 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 C5orf17Q8NAS9 161 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 OR10AG1Q8NH19 301 aa3.27□□□□□ -1.89
LINC00535-202ENST00000517785 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
LINC00535-202ENST00000517785 MGPP08493 103 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 ARL14EPLP0DKL9 152 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 RPL12P30050 165 aaKnown RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 CAMPP49913 170 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 NKX2-5P52952 324 aaPredicted RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 SAPCD1Q5SSQ6 148 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 DNLZQ5SXM8 178 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 PQLC2Q6ZP29 291 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 FAM19A5Q7Z5A7 132 aaPredicted RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 Q86TA4 180 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 OPRPNQ99935 248 aaPredicted RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 RPP21Q9H633 154 aaKnown RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 EPDR1Q9UM22 224 aa3.26□□□□□ -1.89
LINC00535-202ENST00000517785 CARHSP1Q9Y2V2 147 aaKnown RBP3.26□□□□□ -1.89
LINC00535-202ENST00000517785 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 IGLV4-69A0A075B6H9 119 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 IGHV1-58A0A0C4DH39 117 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 A0A1W2PPV4 95 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 ATP6V1G2O95670 118 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 FGF6P10767 208 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 UBE2BP63146 152 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 MT1HP80294 61 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 MEF2BQ02080 365 aaPredicted RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 EIF5AL1Q6IS14 154 aaKnown RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 RNASEKQ6P5S7 137 aaKnown RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 LINC00173Q6ZV60 143 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 SEC22CQ9BRL7 303 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 ZNF471Q9BX82 626 aaPredicted RBP3.25□□□□□ -1.89
LINC00535-202ENST00000517785 SMIM3Q9BZL3 60 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 PPDPFQ9H3Y8 114 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
LINC00535-202ENST00000517785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
LINC00535-202ENST00000517785 IGKV2-29A2NJV5 120 aaPredicted RBP3.24□□□□□ -1.89
LINC00535-202ENST00000517785 CCL25O15444 150 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 APOMO95445 188 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 FAM162BQ5T6X4 162 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 SPANXN1Q5VSR9 72 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 AMMECR1LQ6DCA0 310 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 CAMK2N2Q96S95 79 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 TMA7Q9Y2S6 64 aaKnown RBP3.24□□□□□ -1.89
LINC00535-202ENST00000517785 V9GYH0 126 aa3.24□□□□□ -1.89
LINC00535-202ENST00000517785 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
LINC00535-202ENST00000517785 TRAV6A0A075B6T7 132 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 CFC1BP0CG36 223 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 SMIM17P0DL12 118 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 GCHFRP30047 84 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 BTCP35070 178 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 DEFA1P59665 94 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 IL15RAQ13261 267 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 ASB16-AS1Q495Z4 193 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 OR5A1Q8NGJ0 315 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 ISOC2Q96AB3 205 aa3.23□□□□□ -1.89
LINC00535-202ENST00000517785 M0QXV9 152 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 M0QY20 66 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 PEX7O00628 323 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 SIX6O95475 246 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 CDC34P49427 236 aaPredicted RBP3.22□□□□□ -1.89
LINC00535-202ENST00000517785 UBE2G2P60604 165 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 COTL1Q14019 142 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 LINC00337Q8N6G1 96 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 SCGB1C1Q8TD33 95 aa3.22□□□□□ -1.89
LINC00535-202ENST00000517785 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
LINC00535-202ENST00000517785 LINC00959A0A1B0GUT2 108 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 NAP1L6A6NFF2 107 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 BCL2L11O43521 198 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 ZNF861PO60384 105 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 TSHBP01222 138 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 STAG3L2P0CL84 134 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 STAG3L3P0CL85 134 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms