RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 A0A096LNJ9 63 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 K7EMI3 77 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 ESDP10768 282 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 IGLL5B9A064 214 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 NUDT3O95989 172 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 COTL1Q14019 142 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 LAGE3Q14657 143 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
AP3S1-208ENST00000515066 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
AP3S1-208ENST00000515066 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
AP3S1-208ENST00000515066 CHCHD7Q9BUK0 85 aa11.61□□□□□ -0.55
AP3S1-208ENST00000515066 GTSF1LQ9H1H1 148 aa11.61□□□□□ -0.55
AP3S1-208ENST00000515066 LYSTQ99698 3801 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 S100A6P06703 90 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 FCER1GP30273 86 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
AP3S1-208ENST00000515066 TRBV6-8A0A0A6YYG3 113 aa11.59□□□□□ -0.55
AP3S1-208ENST00000515066 IGHV1-24A0A0C4DH33 117 aa11.59□□□□□ -0.55
AP3S1-208ENST00000515066 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
AP3S1-208ENST00000515066 HSBP1O75506 76 aa11.59□□□□□ -0.55
AP3S1-208ENST00000515066 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
AP3S1-208ENST00000515066 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
AP3S1-208ENST00000515066 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
AP3S1-208ENST00000515066 WWC2-AS2Q96NR7 200 aa11.58□□□□□ -0.56
AP3S1-208ENST00000515066 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
AP3S1-208ENST00000515066 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
AP3S1-208ENST00000515066 HIST3H2BBQ8N257 126 aa11.57□□□□□ -0.56
AP3S1-208ENST00000515066 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
AP3S1-208ENST00000515066 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
AP3S1-208ENST00000515066 AMTP48728 403 aa11.56□□□□□ -0.56
AP3S1-208ENST00000515066 TIRAPP58753 221 aa11.56□□□□□ -0.56
AP3S1-208ENST00000515066 ESRGQ1W209 222 aa11.56□□□□□ -0.56
AP3S1-208ENST00000515066 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
AP3S1-208ENST00000515066 TRBV25-1A0A075B6N4 114 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 HBDP02042 147 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
AP3S1-208ENST00000515066 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
AP3S1-208ENST00000515066 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
AP3S1-208ENST00000515066 ZFAND6Q6FIF0 208 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 C2orf66Q6UXQ4 117 aa11.55□□□□□ -0.56
AP3S1-208ENST00000515066 LELP1Q5T871 98 aa11.54□□□□□ -0.56
AP3S1-208ENST00000515066 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
AP3S1-208ENST00000515066 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
AP3S1-208ENST00000515066 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
AP3S1-208ENST00000515066 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.56
AP3S1-208ENST00000515066 LINC00173Q6ZV60 143 aa11.52□□□□□ -0.57
AP3S1-208ENST00000515066 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.57
AP3S1-208ENST00000515066 FAM104AQ969W3 186 aa11.51□□□□□ -0.57
AP3S1-208ENST00000515066 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
AP3S1-208ENST00000515066 IGIPA6NJ69 53 aa11.5□□□□□ -0.57
AP3S1-208ENST00000515066 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
AP3S1-208ENST00000515066 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
AP3S1-208ENST00000515066 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
AP3S1-208ENST00000515066 DNAH1Q9P2D7 4330 aa11.5□□□□□ -0.57
AP3S1-208ENST00000515066 G0S2P27469 103 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 TCTAP57738 103 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 H7C423 109 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 FGF6P10767 208 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 FABP4P15090 132 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 GAGE6Q13070 117 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
AP3S1-208ENST00000515066 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 Q8N3U1 123 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
AP3S1-208ENST00000515066 VPS13DQ5THJ4 4388 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 UBE2L6O14933 153 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 S100A2P29034 98 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 ERASQ7Z444 233 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
AP3S1-208ENST00000515066 PYGO1Q9Y3Y4 419 aa11.48□□□□□ -0.57
AP3S1-208ENST00000515066 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
AP3S1-208ENST00000515066 CCL18P55774 89 aa11.47□□□□□ -0.57
AP3S1-208ENST00000515066 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
AP3S1-208ENST00000515066 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
AP3S1-208ENST00000515066 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
AP3S1-208ENST00000515066 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
AP3S1-208ENST00000515066 CASC10Q5T4H9 136 aa11.46□□□□□ -0.57
AP3S1-208ENST00000515066 Q8N976 141 aa11.46□□□□□ -0.57
AP3S1-208ENST00000515066 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
AP3S1-208ENST00000515066 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.58
AP3S1-208ENST00000515066 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.58
AP3S1-208ENST00000515066 IGLV4-3A0A075B6K6 122 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 Q6ZUT4 128 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
AP3S1-208ENST00000515066 ATP5LO75964 103 aa11.44□□□□□ -0.58
AP3S1-208ENST00000515066 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
AP3S1-208ENST00000515066 RBX1P62877 108 aa11.44□□□□□ -0.58
AP3S1-208ENST00000515066 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
AP3S1-208ENST00000515066 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
AP3S1-208ENST00000515066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms