RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 UQCC1Q9NVA1 299 aa4.05□□□□□ -1.76
CLDND1-229ENST00000513988 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
CLDND1-229ENST00000513988 GRIFINA4D1Z8 144 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 M0R036 132 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 BCE1O60756 84 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 ATP5HO75947 161 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 LGALS3P17931 250 aaKnown RBP4.04□□□□□ -1.76
CLDND1-229ENST00000513988 MALP21145 153 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 FGF7P21781 194 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 GNG5P63218 68 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 EXTL2Q9UBQ6 330 aa4.04□□□□□ -1.76
CLDND1-229ENST00000513988 TRAV34A0A0B4J273 112 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 UBE2L5PA0A1B0GUS4 154 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 H3BMQ9 156 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 TAS2R30P59541 319 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 DNLZQ5SXM8 178 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 FAM19A2Q8N3H0 131 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 RAB24Q969Q5 203 aa4.03□□□□□ -1.76
CLDND1-229ENST00000513988 LINC00959A0A1B0GUT2 108 aa4.02□□□□□ -1.77
CLDND1-229ENST00000513988 FABP5P3A8MUU1 101 aa4.02□□□□□ -1.77
CLDND1-229ENST00000513988 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
CLDND1-229ENST00000513988 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
CLDND1-229ENST00000513988 C11orf1Q9H5F2 150 aa4.02□□□□□ -1.77
CLDND1-229ENST00000513988 SERTM2A0A1B0GWG4 89 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 KRBOX1C9JBD0 128 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 AKAIN1P0CW23 69 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 RPL12P30050 165 aaKnown RBP4.01□□□□□ -1.77
CLDND1-229ENST00000513988 TMBIM6P55061 237 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 SCP2D1Q9UJQ7 156 aa4.01□□□□□ -1.77
CLDND1-229ENST00000513988 FAM25AB3EWG3 89 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 FAM25CB3EWG5 89 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 FAM25GB3EWG6 89 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 K7EQM0 130 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 COX7A2LO14548 114 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 HPGDSO60760 199 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 CST7O76096 145 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 SPINK1P00995 79 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 FLI1Q01543 452 aaPredicted RBP4□□□□□ -1.77
CLDND1-229ENST00000513988 COTL1Q14019 142 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 TMEM128Q5BJH2 165 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 MZT2AQ6P582 158 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 TMEM252Q8N6L7 170 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 SMDT1Q9H4I9 107 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 MRPL35Q9NZE8 188 aaKnown RBP4□□□□□ -1.77
CLDND1-229ENST00000513988 MBD2Q9UBB5 411 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 RSL24D1Q9UHA3 163 aaKnown RBP4□□□□□ -1.77
CLDND1-229ENST00000513988 BLOC1S6Q9UL45 172 aa4□□□□□ -1.77
CLDND1-229ENST00000513988 UBE2AP49459 152 aa3.99□□□□□ -1.77
CLDND1-229ENST00000513988 NKX2-5P52952 324 aaPredicted RBP3.99□□□□□ -1.77
CLDND1-229ENST00000513988 SSBP1Q04837 148 aaKnown RBP3.99□□□□□ -1.77
CLDND1-229ENST00000513988 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
CLDND1-229ENST00000513988 LBHQ53QV2 105 aaPredicted RBP3.99□□□□□ -1.77
CLDND1-229ENST00000513988 SLC25A21Q9BQT8 299 aaPredicted RBP3.99□□□□□ -1.77
CLDND1-229ENST00000513988 VCXQ9H320 206 aa3.99□□□□□ -1.77
CLDND1-229ENST00000513988 TMSB15BA0A087X1C1 80 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 C7orf66A4D0T2 115 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 SMIM17P0DL12 118 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 TGFBR1P36897 503 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 BCAP31P51572 246 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 KHDC3LQ587J8 217 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 ZNF471Q9BX82 626 aaPredicted RBP3.98□□□□□ -1.77
CLDND1-229ENST00000513988 NPCDR1Q9BY65 106 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 GSKIPQ9P0R6 139 aa3.98□□□□□ -1.77
CLDND1-229ENST00000513988 G3V3Q6 166 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 L7N2F9 121 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 TCRAP04437 139 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 CTRLP40313 264 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 VAMP2P63027 116 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 Q8NBF4 154 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 C15orf40Q8WUR7 153 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 AP3S1Q92572 193 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 MCUBQ9NWR8 336 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
CLDND1-229ENST00000513988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
CLDND1-229ENST00000513988 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
CLDND1-229ENST00000513988 M0QY20 66 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 NDUFA1O15239 70 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 SLC25A20O43772 301 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 SFT2D2O95562 160 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 TAS2R45P59539 299 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 IL18Q14116 193 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 TMEM241Q24JQ0 296 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 C9orf129Q5T035 196 aaKnown RBP3.96□□□□□ -1.78
CLDND1-229ENST00000513988 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 MZT2BQ6NZ67 158 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 Q8N377 158 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 OR10AG1Q8NH19 301 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 TMEM101Q96IK0 257 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 BTF3L4Q96K17 158 aa3.96□□□□□ -1.78
CLDND1-229ENST00000513988 MRPS26Q9BYN8 205 aaKnown RBP3.96□□□□□ -1.78
CLDND1-229ENST00000513988 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 F8WDY8 70 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 MGPP08493 103 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms