RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ZNF256Q9Y2P7 627 aaPredicted RBP3.22□□□□□ -1.89
CLDND1-228ENST00000513873 TIMM8BQ9Y5J9 83 aaPredicted RBP3.22□□□□□ -1.89
CLDND1-228ENST00000513873 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
CLDND1-228ENST00000513873 TET2Q6N021 2002 aaPredicted RBP3.22□□□□□ -1.89
CLDND1-228ENST00000513873 ARHGAP32A7KAX9 2087 aa3.21□□□□□ -1.89
CLDND1-228ENST00000513873 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 A8MTW9 85 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 A8MWV9 139 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 H3BVH4 76 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 M0R2Z0 102 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 M0R381 172 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 ZNF324O75467 553 aaPredicted RBP3.21□□□□□ -1.9
CLDND1-228ENST00000513873 SERF1AO75920 110 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 NXPH4O95158 308 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 APOC4P55056 127 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 SLAQ13239 276 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 SPINK13Q1W4C9 94 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 LBHQ53QV2 105 aaPredicted RBP3.21□□□□□ -1.9
CLDND1-228ENST00000513873 MUC21Q5SSG8 566 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 ADAMTSL5Q6ZMM2 481 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 POM121L12Q8N7R1 296 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 OR10D4PQ8NGN7 298 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 OR10AG1Q8NH19 301 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 HIST1H2BLQ99880 126 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 CITED1Q99966 193 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 C20orf78Q9BR46 151 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 MAP1LC3CQ9BXW4 147 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 JPT2Q9H910 190 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 TP53TG3Q9ULZ0 132 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 U3KQK5 164 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
CLDND1-228ENST00000513873 IGHV3-16A0A0C4DH30 117 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 SMIM9A6NGZ8 99 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 HSBP1L1C9JCN9 74 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 D6R8Y8 96 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 M0R2P5 195 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 SSTP61278 116 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 SMAGPQ0VAQ4 97 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 PMCHL1Q16048 86 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 RRN3P1Q2M238 152 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 MRPL51Q4U2R6 128 aaKnown RBP3.2□□□□□ -1.9
CLDND1-228ENST00000513873 ORMDL2Q53FV1 153 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 PDZD11Q5EBL8 140 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 KPRPQ5T749 579 aaPredicted RBP3.2□□□□□ -1.9
CLDND1-228ENST00000513873 Q6ZVQ6 151 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 NIT1Q86X76 327 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 AMN1Q8IY45 258 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 WFDC9Q8NEX5 89 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 C18orf32Q8TCD1 76 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 RCHY1Q96PM5 261 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 C12orf57Q99622 126 aa3.2□□□□□ -1.9
CLDND1-228ENST00000513873 DYNC2H1Q8NCM8 4307 aaKnown RBP3.2□□□□□ -1.9
CLDND1-228ENST00000513873 TRAV12-2A0A075B6T6 113 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 KIR2DL5BA0A0G2JN68 375 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 KIR2DL5BA0A0G2JPC4 375 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 TSTD3H0UI37 97 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 GNRH2O43555 120 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 ATP5LO75964 103 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 LEPROTL1O95214 131 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 MGPP08493 103 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 HTN1P15515 57 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 JOSD1Q15040 202 aaPredicted RBP3.19□□□□□ -1.9
CLDND1-228ENST00000513873 LGALS9BQ3B8N2 356 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 GDF5OSQ5U4N7 250 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 LINC00518Q8N0U6 118 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 KIR2DL5AQ8N109 375 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 DEFB125Q8N687 156 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 Q8N8P6 123 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 KIR2DL5BQ8NHK3 375 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 MRAPQ8TCY5 172 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 C16orf74Q96GX8 76 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 C9orf85Q96MD7 179 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 KIR2DL4Q99706 377 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 ST20Q9HBF5 79 aa3.19□□□□□ -1.9
CLDND1-228ENST00000513873 RYR2Q92736 4967 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 DNAH7Q8WXX0 4024 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 IGHV3-38A0A0C4DH36 116 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 MUC21A0A0G2JKD1 596 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 MUC21A0A140T8X8 626 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 LOC389332A0A1B0GUA5 103 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 TEX48A0A1B0GUV7 120 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 C3orf84H3BNL1 204 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 HBDP02042 147 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 PRB4P10163 310 aaPredicted RBP3.18□□□□□ -1.9
CLDND1-228ENST00000513873 RNASE3P12724 160 aaKnown RBP3.18□□□□□ -1.9
CLDND1-228ENST00000513873 EVI2AP22794 236 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 FCER1GP30273 86 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 KRTDAPP60985 99 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 RPL32P62910 135 aaKnown RBP3.18□□□□□ -1.9
CLDND1-228ENST00000513873 LAGE3Q14657 143 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 ZNF56Q15929 161 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 PRR9Q5T870 116 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
CLDND1-228ENST00000513873 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
CLDND1-228ENST00000513873 DNAJC30Q96LL9 226 aa3.18□□□□□ -1.9
CLDND1-228ENST00000513873 TMEM70Q9BUB7 260 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms