RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 IGHV1-8P0DP01 117 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 ZNF32P17041 273 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 ZNF826PQ6ZT77 177 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 TMEM141Q96I45 108 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 FAM167A-AS1Q96KT0 104 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 DOCK8Q8NF50 2099 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 KIAA1549Q9HCM3 1950 aa2.67□□□□□ -1.98
NIPBL-207ENST00000513819 A0A087WVE0 104 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 TRAV12-1A0A0B4J245 112 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 TRAV22A0A0B4J277 110 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 HMGN4O00479 90 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 SH2D1AO60880 128 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 ARL14EPLP0DKL9 152 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 COX6B1P14854 86 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 SPINT3P49223 89 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 SPANXN1Q5VSR9 72 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 Q8N6K4 173 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 RMI2Q96E14 147 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 ARHGAP5-AS1Q96IT6 56 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 CYP4F30PQ9H0H9 118 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 TMEM167BQ9NRX6 74 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 ZNF355PQ9NSJ1 428 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 TMEM14AQ9Y6G1 99 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 PTPRBP23467 1997 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
NIPBL-207ENST00000513819 TNS1Q9HBL0 1735 aaKnown RBP2.65□□□□□ -1.98
NIPBL-207ENST00000513819 PLXNA3P51805 1871 aa2.65□□□□□ -1.98
NIPBL-207ENST00000513819 RALGAPA2Q2PPJ7 1873 aa2.65□□□□□ -1.98
NIPBL-207ENST00000513819 IGLV1-50A0A075B6I6 118 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV2D-24A0A075B6R9 120 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV6D-21A0A0A0MT36 114 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV1-12A0A0C4DH73 117 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 A0A0J9YY99 117 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 C5orf67F2Z3F1 127 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV1D-12P01611 117 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 COX6CP09669 75 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 RPL28P46779 137 aaKnown RBP2.65□□□□□ -1.99
NIPBL-207ENST00000513819 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
NIPBL-207ENST00000513819 Q5VV11 94 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 NTM-AS1Q6ZSK4 140 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 PTPRDP23468 1912 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 PTPRSQ13332 1948 aa2.65□□□□□ -1.99
NIPBL-207ENST00000513819 DOCK9Q9BZ29 2069 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 LTBP2Q14767 1821 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 BRWD3Q6RI45 1802 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 IGHV1-45A0A0A0MS14 117 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV3D-7A0A0C4DH55 119 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 TRBV7-4A0A0J9YYF1 115 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 SDHAF1A6NFY7 115 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 ZNF815PA8K554 130 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 C10orf142B7Z368 130 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 IGKV3-11P04433 115 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 TFF3Q07654 80 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 LINC00483Q53H64 154 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 ORMDL3Q8N138 153 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 KLF14Q8TD94 323 aaPredicted RBP2.64□□□□□ -1.99
NIPBL-207ENST00000513819 ZNRD1Q9P1U0 126 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 TIMM8BQ9Y5J9 83 aaPredicted RBP2.64□□□□□ -1.99
NIPBL-207ENST00000513819 ICOSQ9Y6W8 199 aa2.64□□□□□ -1.99
NIPBL-207ENST00000513819 TNRC6CQ9HCJ0 1690 aaKnown RBP2.63□□□□□ -1.99
NIPBL-207ENST00000513819 MGAMO43451 1857 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 SSC5DA1L4H1 1573 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 TRAV40A0A0B4J280 105 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 A0A1B0GW54 56 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 HCG22E2RYF7 251 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 F8VRH5 84 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 CD24P25063 80 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 BSPH1Q075Z2 132 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 MIR17HGQ75NE6 70 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 UBALD1Q8TB05 177 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 LINC01560Q8TB33 94 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 CAMK2N2Q96S95 79 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 LINC00574Q9H8X3 128 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 SND1-IT1Q9HBX3 110 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 ARID1AO14497 2285 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 SNRNP200O75643 2136 aaKnown RBP2.63□□□□□ -1.99
NIPBL-207ENST00000513819 SHROOM3Q8TF72 1996 aa2.63□□□□□ -1.99
NIPBL-207ENST00000513819 COL11A1P12107 1806 aaPredicted RBP2.63□□□□□ -1.99
NIPBL-207ENST00000513819 POLEQ07864 2286 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 TRAV23DV6A0A075B6W5 121 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 C11orf86A6NJI1 115 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 M0R135 149 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 LEPROTO15243 131 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 IAPPP10997 89 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 ZNF137PP52743 207 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 LINC00315P59091 139 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 TMEM14BQ9NUH8 114 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 C22orf24Q9Y442 160 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 SNURFQ9Y675 71 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 R4GMQ9 66 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 ZNF831Q5JPB2 1677 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 ANAPC1Q9H1A4 1944 aa2.62□□□□□ -1.99
NIPBL-207ENST00000513819 KIAA2026Q5HYC2 2103 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms