RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 DNAH11Q96DT5 4516 aa10.33□□□□□ -0.76
SQSTM1-214ENST00000512234 HECTD4Q9Y4D8 3996 aa10.33□□□□□ -0.76
SQSTM1-214ENST00000512234 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
SQSTM1-214ENST00000512234 NRACQ8N912 160 aa10.33□□□□□ -0.76
SQSTM1-214ENST00000512234 ELOBQ15370 118 aa10.32□□□□□ -0.76
SQSTM1-214ENST00000512234 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1-214ENST00000512234 KLK12Q9UKR0 248 aa10.32□□□□□ -0.76
SQSTM1-214ENST00000512234 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
SQSTM1-214ENST00000512234 D6R8Y8 96 aa10.31□□□□□ -0.76
SQSTM1-214ENST00000512234 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
SQSTM1-214ENST00000512234 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
SQSTM1-214ENST00000512234 CKS2P33552 79 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 TMEM70Q9BUB7 260 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 TRBV24-1A0A075B6N3 115 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 A0A087WX48 190 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 A0A1B0GW15 77 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 IBA57-AS1B1ANH7 110 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 PMCHP20382 165 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 FABP9Q0Z7S8 132 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 COTL1Q14019 142 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
SQSTM1-214ENST00000512234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 NPYP01303 97 aa10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 AMTP48728 403 aa10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 ATP5L2Q7Z4Y8 100 aa10.29□□□□□ -0.76
SQSTM1-214ENST00000512234 A0A1B0GVY2 172 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 TSHBP01222 138 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 RBX1P62877 108 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 KCNIP4Q6PIL6 250 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 TMEM243Q9BU79 118 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
SQSTM1-214ENST00000512234 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.76
SQSTM1-214ENST00000512234 TNFRSF6BO95407 300 aa10.27□□□□□ -0.76
SQSTM1-214ENST00000512234 KIAA1644Q3SXP7 199 aa10.27□□□□□ -0.76
SQSTM1-214ENST00000512234 FRZBQ92765 325 aa10.27□□□□□ -0.76
SQSTM1-214ENST00000512234 UBE2WQ96B02 151 aa10.27□□□□□ -0.76
SQSTM1-214ENST00000512234 I3L3M4 83 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 TMEM136Q6ZRR5 245 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 C10orf126Q8N4M7 172 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 IMMP2LQ96T52 175 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 CHCHD7Q9BUK0 85 aa10.27□□□□□ -0.77
SQSTM1-214ENST00000512234 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
SQSTM1-214ENST00000512234 SUMO2P61956 95 aaKnown RBP10.26□□□□□ -0.77
SQSTM1-214ENST00000512234 TMEM97Q5BJF2 176 aa10.25□□□□□ -0.77
SQSTM1-214ENST00000512234 ENHOQ6UWT2 76 aa10.25□□□□□ -0.77
SQSTM1-214ENST00000512234 LOC389332A0A1B0GUA5 103 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 APCSP02743 223 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 S100PP25815 95 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 TRBV27A0A0K0K1C4 114 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 LECT2O14960 151 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
SQSTM1-214ENST00000512234 VCYO14598 125 aa10.23□□□□□ -0.77
SQSTM1-214ENST00000512234 UBE2L6O14933 153 aa10.23□□□□□ -0.77
SQSTM1-214ENST00000512234 TCAPO15273 167 aa10.23□□□□□ -0.77
SQSTM1-214ENST00000512234 WFDC2Q14508 124 aa10.23□□□□□ -0.77
SQSTM1-214ENST00000512234 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
SQSTM1-214ENST00000512234 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
SQSTM1-214ENST00000512234 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 K7EP13 123 aa10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 PSCAO43653 123 aa10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 S100A2P29034 98 aa10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.77
SQSTM1-214ENST00000512234 PHOX2AO14813 284 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 FGF6P10767 208 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 ESDP10768 282 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 FCER1GP30273 86 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 NFE4Q86UQ8 179 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.78
SQSTM1-214ENST00000512234 LAGE3Q14657 143 aa10.2□□□□□ -0.78
SQSTM1-214ENST00000512234 C20orf78Q9BR46 151 aa10.2□□□□□ -0.78
SQSTM1-214ENST00000512234 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
SQSTM1-214ENST00000512234 A0A087WTM6 91 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms