RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
NR1I3-228ENST00000511676 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
NR1I3-228ENST00000511676 MAP1LC3CQ9BXW4 147 aa6.44□□□□□ -1.38
NR1I3-228ENST00000511676 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
NR1I3-228ENST00000511676 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 C20orf202A1L168 122 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 ATP5G1P05496 136 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 CRYBA4P53673 196 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 DAD1P61803 113 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 FHL2Q14192 279 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 PMCHL1Q16048 86 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
NR1I3-228ENST00000511676 TRAV26-1A0A087WT03 109 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 IGHV3-73A0A0B4J1V6 119 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 H3BNG1 76 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 LY6G6CO95867 125 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 NUDT3O95989 172 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 TSHBP01222 138 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 LINC00694P0DN24 101 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 DEFB130BP0DP73 79 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 DEFB130AP0DP74 79 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 EMP1P54849 157 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 UBE2D3P61077 147 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 UBE2D2P62837 147 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 COTL1Q14019 142 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 PYY3Q5JQD4 70 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 Q6ZSN1 163 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 ERASQ7Z444 233 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 LINC00518Q8N0U6 118 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
NR1I3-228ENST00000511676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
NR1I3-228ENST00000511676 SYS1-DBNDD2H3BUS1 97 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 H7C423 109 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 PAPPA-AS1Q5QFB9 102 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 IFI27L1Q96BM0 104 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 TIMM21Q9BVV7 248 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 PYGO1Q9Y3Y4 419 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 TENM2Q9NT68 2774 aa6.41□□□□□ -1.38
NR1I3-228ENST00000511676 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
NR1I3-228ENST00000511676 KRTDAPP60985 99 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 CEMP1Q6PRD7 247 aaPredicted RBP6.4□□□□□ -1.38
NR1I3-228ENST00000511676 C20orf203Q8NBC4 194 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.38
NR1I3-228ENST00000511676 NACAE9PAV3 2078 aa6.4□□□□□ -1.39
NR1I3-228ENST00000511676 RYR3Q15413 4870 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 P0DMU3 169 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 S100A12P80511 92 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 TEX43Q6ZNM6 134 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 C12orf57Q99622 126 aa6.39□□□□□ -1.39
NR1I3-228ENST00000511676 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
NR1I3-228ENST00000511676 IGIPA6NJ69 53 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 SCGB1D1O95968 90 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 TIRAPP58753 221 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 Q6ZN92 141 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
NR1I3-228ENST00000511676 SCGB3A1Q96QR1 104 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 CELA1Q9UNI1 258 aa6.38□□□□□ -1.39
NR1I3-228ENST00000511676 PAX4O43316 350 aa6.37□□□□□ -1.39
NR1I3-228ENST00000511676 PKIAP61925 76 aa6.37□□□□□ -1.39
NR1I3-228ENST00000511676 Q8N976 141 aa6.37□□□□□ -1.39
NR1I3-228ENST00000511676 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GAGE12JA6NER3 117 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 DEFB4AO15263 64 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GYPEP15421 78 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 ZNF25P17030 456 aaPredicted RBP6.36□□□□□ -1.39
NR1I3-228ENST00000511676 PLNP26678 52 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GAGE1Q13065 139 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GAGE4Q13068 117 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GAGE5Q13069 117 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
NR1I3-228ENST00000511676 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 GAGE13Q4V321 117 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 LINC00173Q6ZV60 143 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 NEGR1Q7Z3B1 354 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 ATP6V0E2Q8NHE4 81 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 CHCHD7Q9BUK0 85 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 RETNQ9HD89 108 aa6.36□□□□□ -1.39
NR1I3-228ENST00000511676 DNAH7Q8WXX0 4024 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 A0A087WX48 190 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 TRBV6-8A0A0A6YYG3 113 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 PRSS1P07477 247 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 ODF1Q14990 250 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
NR1I3-228ENST00000511676 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms