RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 Q86TA4 180 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 OR5A1Q8NGJ0 315 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 CAMK2N2Q96S95 79 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
SNF8-207ENST00000509995 ARL14EPLP0DKL9 152 aa6.12□□□□□ -1.43
SNF8-207ENST00000509995 NKX2-5P52952 324 aaPredicted RBP6.12□□□□□ -1.43
SNF8-207ENST00000509995 SUMO1P63165 101 aaKnown RBP6.12□□□□□ -1.43
SNF8-207ENST00000509995 CTAG1AP78358 180 aa6.12□□□□□ -1.43
SNF8-207ENST00000509995 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
SNF8-207ENST00000509995 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
SNF8-207ENST00000509995 M0QXV9 152 aa6.11□□□□□ -1.43
SNF8-207ENST00000509995 M0R2T5 61 aa6.11□□□□□ -1.43
SNF8-207ENST00000509995 SMIM17P0DL12 118 aa6.11□□□□□ -1.43
SNF8-207ENST00000509995 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
SNF8-207ENST00000509995 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
SNF8-207ENST00000509995 RBM38Q9H0Z9 239 aaKnown RBP6.11□□□□□ -1.43
SNF8-207ENST00000509995 A0A1W2PPV4 95 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 A6NHS1 94 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 BCL2L11O43521 198 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 DEFA3P59666 94 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 COTL1Q14019 142 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 PYDC2Q56P42 97 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 COX8CQ7Z4L0 72 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
SNF8-207ENST00000509995 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 LINC00959A0A1B0GUT2 108 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 IL15RAQ13261 267 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 SPANXN1Q5VSR9 72 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 RNASEKQ6P5S7 137 aaKnown RBP6.09□□□□□ -1.43
SNF8-207ENST00000509995 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 C2orf48Q96LS8 159 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
SNF8-207ENST00000509995 SNAI2O43623 268 aa6.08□□□□□ -1.44
SNF8-207ENST00000509995 MGPP08493 103 aa6.08□□□□□ -1.44
SNF8-207ENST00000509995 ESDP10768 282 aa6.08□□□□□ -1.44
SNF8-207ENST00000509995 STAG3L2P0CL84 134 aa6.07□□□□□ -1.44
SNF8-207ENST00000509995 STAG3L3P0CL85 134 aa6.07□□□□□ -1.44
SNF8-207ENST00000509995 GCHFRP30047 84 aa6.07□□□□□ -1.44
SNF8-207ENST00000509995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
SNF8-207ENST00000509995 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
SNF8-207ENST00000509995 OR5AL1P0C617 328 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 MALP21145 153 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 SSTP61278 116 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 RASL11AQ6T310 242 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 WFDC1Q9HC57 220 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 ZFP30Q9Y2G7 519 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 V9GYH0 126 aa6.06□□□□□ -1.44
SNF8-207ENST00000509995 NAP1L6A6NFF2 107 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 H7C423 109 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 PEX7O00628 323 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 NUPR1O60356 82 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 CXCL1P09341 107 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 ZNF25P17030 456 aaPredicted RBP6.05□□□□□ -1.44
SNF8-207ENST00000509995 CDC34P49427 236 aaPredicted RBP6.05□□□□□ -1.44
SNF8-207ENST00000509995 SS18Q15532 418 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 IMMP2LQ96T52 175 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 NIT2Q9NQR4 276 aa6.05□□□□□ -1.44
SNF8-207ENST00000509995 BTCP35070 178 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 RPL28P46779 137 aaKnown RBP6.04□□□□□ -1.44
SNF8-207ENST00000509995 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 OR2D3Q8NGH3 330 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 SCGB1C1Q8TD33 95 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 CTDSP1Q9GZU7 261 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 TMEM167BQ9NRX6 74 aa6.04□□□□□ -1.44
SNF8-207ENST00000509995 A0A1W2PRE2 83 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 COX7A2LO14548 114 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 TLX1NBP0CAT3 122 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 NTF3P20783 257 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 LRRC37A5PQ49AS3 106 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 Q6ZNX1 250 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 MRPL35Q9NZE8 188 aaKnown RBP6.03□□□□□ -1.44
SNF8-207ENST00000509995 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
SNF8-207ENST00000509995 SPAG11BQ08648 103 aa6.02□□□□□ -1.45
SNF8-207ENST00000509995 RAB24Q969Q5 203 aa6.02□□□□□ -1.45
SNF8-207ENST00000509995 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
SNF8-207ENST00000509995 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 A0A1B0GVG6 124 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 G3V3Q6 166 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
SNF8-207ENST00000509995 HIST1H2BAQ96A08 127 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 FMC1Q96HJ9 113 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 TMEM101Q96IK0 257 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 BTF3L4Q96K17 158 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 SEC22CQ9BRL7 303 aa6.01□□□□□ -1.45
SNF8-207ENST00000509995 TNFRSF6BO95407 300 aa6□□□□□ -1.45
SNF8-207ENST00000509995 NCR2O95944 276 aa6□□□□□ -1.45
SNF8-207ENST00000509995 LTAP01374 205 aa6□□□□□ -1.45
SNF8-207ENST00000509995 APCSP02743 223 aa6□□□□□ -1.45
SNF8-207ENST00000509995 XP32Q5T750 250 aa6□□□□□ -1.45
SNF8-207ENST00000509995 H0YIZ8 118 aa5.99□□□□□ -1.45
SNF8-207ENST00000509995 ATP6V1G2O95670 118 aa5.99□□□□□ -1.45
SNF8-207ENST00000509995 CXorf1O96002 111 aa5.99□□□□□ -1.45
SNF8-207ENST00000509995 UBE2G1P62253 170 aa5.99□□□□□ -1.45
SNF8-207ENST00000509995 SMIM3Q9BZL3 60 aa5.99□□□□□ -1.45
SNF8-207ENST00000509995 HSPB11Q9Y547 144 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms