RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-223ENST00000509982 NDUFA11Q86Y39 141 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 C11orf72Q8NBR9 251 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 LINC01587Q99440 93 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 GAGE13Q4V321 117 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 Q6ZSV7 163 aa13.5□□□□□ -0.25
CDK11A-223ENST00000509982 CUBNO60494 3623 aa13.49□□□□□ -0.25
CDK11A-223ENST00000509982 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
CDK11A-223ENST00000509982 ETDBQ3ZM63 59 aa13.48□□□□□ -0.25
CDK11A-223ENST00000509982 PYGO1Q9Y3Y4 419 aa13.48□□□□□ -0.25
CDK11A-223ENST00000509982 CFC1BP0CG36 223 aa13.48□□□□□ -0.25
CDK11A-223ENST00000509982 CFC1P0CG37 223 aa13.48□□□□□ -0.25
CDK11A-223ENST00000509982 C11orf44Q8N8P7 122 aa13.48□□□□□ -0.25
CDK11A-223ENST00000509982 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
CDK11A-223ENST00000509982 LOC107984156A0A0G2JMH3 177 aa13.46□□□□□ -0.25
CDK11A-223ENST00000509982 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
CDK11A-223ENST00000509982 ARL17AQ8IVW1 177 aa13.46□□□□□ -0.25
CDK11A-223ENST00000509982 CHCHD7Q9BUK0 85 aa13.46□□□□□ -0.25
CDK11A-223ENST00000509982 INSP01308 110 aa13.46□□□□□ -0.26
CDK11A-223ENST00000509982 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.26
CDK11A-223ENST00000509982 WFDC11Q8NEX6 87 aa13.46□□□□□ -0.26
CDK11A-223ENST00000509982 A0A1W2PRX2 142 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 UBE2D3P61077 147 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 UBE2D2P62837 147 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 C10orf126Q8N4M7 172 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 PTH2Q96A98 100 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 SPXQ9BT56 116 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 WNK1Q9H4A3 2382 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 XCL2Q9UBD3 114 aa13.45□□□□□ -0.26
CDK11A-223ENST00000509982 CCDC168Q8NDH2 2452 aa13.44□□□□□ -0.26
CDK11A-223ENST00000509982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.44□□□□□ -0.26
CDK11A-223ENST00000509982 IGKV2-29A2NJV5 120 aaPredicted RBP13.44□□□□□ -0.26
CDK11A-223ENST00000509982 AZU1P20160 251 aa13.44□□□□□ -0.26
CDK11A-223ENST00000509982 MRPS36P82909 103 aaKnown RBP13.44□□□□□ -0.26
CDK11A-223ENST00000509982 LINC00467Q9BRT7 94 aa13.44□□□□□ -0.26
CDK11A-223ENST00000509982 FLNAP21333 2647 aaKnown RBP13.44□□□□□ -0.26
CDK11A-223ENST00000509982 EIF4EBP3O60516 100 aaPredicted RBP13.43□□□□□ -0.26
CDK11A-223ENST00000509982 IGHV3-53P01767 116 aa13.43□□□□□ -0.26
CDK11A-223ENST00000509982 PSMB2P49721 201 aa13.43□□□□□ -0.26
CDK11A-223ENST00000509982 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
CDK11A-223ENST00000509982 TMEM86BQ8N661 226 aa13.43□□□□□ -0.26
CDK11A-223ENST00000509982 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
CDK11A-223ENST00000509982 TRAV8-3A0A0A6YYJ7 113 aa13.42□□□□□ -0.26
CDK11A-223ENST00000509982 ADARB2-AS1A8MUL3 147 aa13.42□□□□□ -0.26
CDK11A-223ENST00000509982 IGHV3-30-3P0DP02 117 aa13.42□□□□□ -0.26
CDK11A-223ENST00000509982 SMCPP49901 116 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-223ENST00000509982 ESM1Q9NQ30 184 aa13.42□□□□□ -0.26
CDK11A-223ENST00000509982 NIPBLQ6KC79 2804 aaeCLIP13.42□□□□□ -0.265e-6■■■□□ 16
CDK11A-223ENST00000509982 A4D1N5 150 aa13.42□□□□□ -0.26
CDK11A-223ENST00000509982 INSL3P51460 131 aa13.41□□□□□ -0.26
CDK11A-223ENST00000509982 TSSC4Q9Y5U2 329 aaPredicted RBP13.41□□□□□ -0.26
CDK11A-223ENST00000509982 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
CDK11A-223ENST00000509982 RS1O15537 224 aa13.41□□□□□ -0.26
CDK11A-223ENST00000509982 CRYBA4P53673 196 aa13.41□□□□□ -0.26
CDK11A-223ENST00000509982 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
CDK11A-223ENST00000509982 Q6ZUT4 128 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 C1orf158Q8N1D5 194 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 PRO1854Q9UHT4 67 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 SETD2Q9BYW2 2564 aaPredicted RBP13.4□□□□□ -0.26
CDK11A-223ENST00000509982 A0A0J9YXY3 114 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 FHL3Q13643 280 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 GTSF1LQ9H1H1 148 aa13.4□□□□□ -0.26
CDK11A-223ENST00000509982 TCL1BO95988 128 aa13.39□□□□□ -0.27
CDK11A-223ENST00000509982 HIST2H2BCQ6DN03 193 aa13.39□□□□□ -0.27
CDK11A-223ENST00000509982 STHQ8IWL8 128 aa13.39□□□□□ -0.27
CDK11A-223ENST00000509982 SPANXA1Q9NS26 97 aa13.39□□□□□ -0.27
CDK11A-223ENST00000509982 GAGE12HA6NDE8 117 aa13.39□□□□□ -0.27
CDK11A-223ENST00000509982 TENM4Q6N022 2769 aa13.38□□□□□ -0.27
CDK11A-223ENST00000509982 CCL24O00175 119 aa13.38□□□□□ -0.27
CDK11A-223ENST00000509982 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
CDK11A-223ENST00000509982 A8MZ25 164 aa13.38□□□□□ -0.27
CDK11A-223ENST00000509982 ZNF418Q8TF45 676 aaPredicted RBP13.38□□□□□ -0.27
CDK11A-223ENST00000509982 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
CDK11A-223ENST00000509982 TINCRA0A1B0GVN0 87 aa13.37□□□□□ -0.27
CDK11A-223ENST00000509982 TMEM263Q8WUH6 116 aaKnown RBP13.37□□□□□ -0.27
CDK11A-223ENST00000509982 SIGMAR1Q99720 223 aa13.37□□□□□ -0.27
CDK11A-223ENST00000509982 LITAFQ99732 161 aa13.37□□□□□ -0.27
CDK11A-223ENST00000509982 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 IGHV1-58A0A0C4DH39 117 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 J3QR89 54 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 IL17DQ8TAD2 202 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 CITED2Q99967 270 aaPredicted RBP13.36□□□□□ -0.27
CDK11A-223ENST00000509982 SPATA25Q9BR10 227 aa13.36□□□□□ -0.27
CDK11A-223ENST00000509982 TRGV1A0A0A0MS02 117 aa13.35□□□□□ -0.27
CDK11A-223ENST00000509982 LYRM7Q5U5X0 104 aa13.35□□□□□ -0.27
CDK11A-223ENST00000509982 SETXQ7Z333 2677 aaKnown RBP13.35□□□□□ -0.27
CDK11A-223ENST00000509982 IGHV3-33P01772 117 aa13.35□□□□□ -0.27
CDK11A-223ENST00000509982 VSIG2Q96IQ7 327 aa13.35□□□□□ -0.27
CDK11A-223ENST00000509982 SMAGPQ0VAQ4 97 aa13.34□□□□□ -0.27
CDK11A-223ENST00000509982 JMJD1CQ15652 2540 aa13.34□□□□□ -0.27
CDK11A-223ENST00000509982 A0A0B4J2C4 111 aa13.34□□□□□ -0.27
CDK11A-223ENST00000509982 C1QTNF4Q9BXJ3 329 aa13.34□□□□□ -0.27
CDK11A-223ENST00000509982 NDUFA12Q9UI09 145 aa13.34□□□□□ -0.27
CDK11A-223ENST00000509982 H7C2G1 150 aa13.33□□□□□ -0.28
CDK11A-223ENST00000509982 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
CDK11A-223ENST00000509982 ACANP16112 2415 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms