RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
HMGCR-208ENST00000509431 AP1S3Q96PC3 154 aa7.85□□□□□ -1.15
HMGCR-208ENST00000509431 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
HMGCR-208ENST00000509431 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
HMGCR-208ENST00000509431 CCL25O15444 150 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 STAG3L2P0CL84 134 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 STAG3L3P0CL85 134 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 GCHFRP30047 84 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 NKX2-5P52952 324 aaPredicted RBP7.84□□□□□ -1.15
HMGCR-208ENST00000509431 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
HMGCR-208ENST00000509431 UBE2BP63146 152 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 OR5A1Q8NGJ0 315 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 TMEM167BQ9NRX6 74 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 V9GYH0 126 aa7.84□□□□□ -1.15
HMGCR-208ENST00000509431 LCE2BO14633 110 aa7.83□□□□□ -1.16
HMGCR-208ENST00000509431 SNAI2O43623 268 aa7.83□□□□□ -1.16
HMGCR-208ENST00000509431 ATP6V1G2O95670 118 aa7.83□□□□□ -1.16
HMGCR-208ENST00000509431 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
HMGCR-208ENST00000509431 LINC00304Q8N9R0 145 aa7.83□□□□□ -1.16
HMGCR-208ENST00000509431 C19orf71A6NCJ1 209 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 H7C423 109 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 TSHBP01222 138 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 OR5AL1P0C617 328 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 CDC34P49427 236 aaPredicted RBP7.82□□□□□ -1.16
HMGCR-208ENST00000509431 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
HMGCR-208ENST00000509431 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 C2orf48Q96LS8 159 aa7.82□□□□□ -1.16
HMGCR-208ENST00000509431 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
HMGCR-208ENST00000509431 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
HMGCR-208ENST00000509431 CENPXA8MT69 81 aa7.81□□□□□ -1.16
HMGCR-208ENST00000509431 ESDP10768 282 aa7.81□□□□□ -1.16
HMGCR-208ENST00000509431 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
HMGCR-208ENST00000509431 PEX7O00628 323 aa7.8□□□□□ -1.16
HMGCR-208ENST00000509431 MGPP08493 103 aa7.8□□□□□ -1.16
HMGCR-208ENST00000509431 SS18Q15532 418 aa7.8□□□□□ -1.16
HMGCR-208ENST00000509431 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
HMGCR-208ENST00000509431 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
HMGCR-208ENST00000509431 FAM168BA1KXE4 195 aa7.79□□□□□ -1.16
HMGCR-208ENST00000509431 BCL2L11O43521 198 aa7.79□□□□□ -1.16
HMGCR-208ENST00000509431 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
HMGCR-208ENST00000509431 BTCP35070 178 aa7.79□□□□□ -1.16
HMGCR-208ENST00000509431 FP248Q71RG6 208 aaPredicted RBP7.79□□□□□ -1.16
HMGCR-208ENST00000509431 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
HMGCR-208ENST00000509431 NIT2Q9NQR4 276 aa7.79□□□□□ -1.16
HMGCR-208ENST00000509431 MUC21A0A140T8X8 626 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 M0QXV9 152 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 CXorf1O96002 111 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 MALP21145 153 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 TRIQKQ629K1 86 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 FMC1Q96HJ9 113 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 IMMP2LQ96T52 175 aa7.78□□□□□ -1.16
HMGCR-208ENST00000509431 OPRPNQ99935 248 aaPredicted RBP7.78□□□□□ -1.16
HMGCR-208ENST00000509431 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
HMGCR-208ENST00000509431 NUPR1O60356 82 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 NCR2O95944 276 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 UBE2G1P62253 170 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 BTF3L4Q96K17 158 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 SEC22CQ9BRL7 303 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 NKX6-2Q9C056 277 aaPredicted RBP7.76□□□□□ -1.17
HMGCR-208ENST00000509431 HSPB11Q9Y547 144 aa7.76□□□□□ -1.17
HMGCR-208ENST00000509431 SSTP61278 116 aa7.75□□□□□ -1.17
HMGCR-208ENST00000509431 TMEM101Q96IK0 257 aa7.75□□□□□ -1.17
HMGCR-208ENST00000509431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
HMGCR-208ENST00000509431 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
HMGCR-208ENST00000509431 COX7A2LO14548 114 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 LTAP01374 205 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 S100A5P33763 92 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 DEFA3P59666 94 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
HMGCR-208ENST00000509431 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
HMGCR-208ENST00000509431 F8WDY8 70 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 H0YIZ8 118 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 NTF3P20783 257 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
HMGCR-208ENST00000509431 OR2D3Q8NGH3 330 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 SMIM3Q9BZL3 60 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 WFDC1Q9HC57 220 aa7.73□□□□□ -1.17
HMGCR-208ENST00000509431 G3V3Q6 166 aa7.72□□□□□ -1.17
HMGCR-208ENST00000509431 APCSP02743 223 aa7.72□□□□□ -1.17
HMGCR-208ENST00000509431 LRRC37A5PQ49AS3 106 aa7.72□□□□□ -1.17
HMGCR-208ENST00000509431 FAM229BQ4G0N7 80 aa7.72□□□□□ -1.17
HMGCR-208ENST00000509431 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
HMGCR-208ENST00000509431 MBP02144 154 aa7.71□□□□□ -1.18
HMGCR-208ENST00000509431 SPAG11BQ08648 103 aa7.71□□□□□ -1.18
HMGCR-208ENST00000509431 Q6ZNX1 250 aa7.71□□□□□ -1.18
HMGCR-208ENST00000509431 A0A1B0GVG6 124 aa7.7□□□□□ -1.18
HMGCR-208ENST00000509431 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 ACTR3CQ9C0K3 210 aaPredicted RBP7.69□□□□□ -1.18
HMGCR-208ENST00000509431 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 SMDT1Q9H4I9 107 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
HMGCR-208ENST00000509431 M0R2T5 61 aa7.68□□□□□ -1.18
HMGCR-208ENST00000509431 NOL3O60936 208 aaKnown RBP7.68□□□□□ -1.18
HMGCR-208ENST00000509431 UBE2G2P60604 165 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms