RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 VAX2Q9UIW0 290 aa6.32□□□□□ -1.4
COPS4-207ENST00000509317 IGKV3OR2-268A0A0C4DH90 116 aa6.31□□□□□ -1.4
COPS4-207ENST00000509317 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
COPS4-207ENST00000509317 NDUFS6O75380 124 aaKnown RBP6.31□□□□□ -1.4
COPS4-207ENST00000509317 PKIAP61925 76 aa6.31□□□□□ -1.4
COPS4-207ENST00000509317 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPS4-207ENST00000509317 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
COPS4-207ENST00000509317 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
COPS4-207ENST00000509317 IGHV1-24A0A0C4DH33 117 aa6.3□□□□□ -1.4
COPS4-207ENST00000509317 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
COPS4-207ENST00000509317 RPS10P46783 165 aaKnown RBP6.3□□□□□ -1.4
COPS4-207ENST00000509317 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
COPS4-207ENST00000509317 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
COPS4-207ENST00000509317 EIF5AL1Q6IS14 154 aaKnown RBP6.29□□□□□ -1.4
COPS4-207ENST00000509317 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
COPS4-207ENST00000509317 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
COPS4-207ENST00000509317 GNG13Q9P2W3 67 aa6.29□□□□□ -1.4
COPS4-207ENST00000509317 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 TEX46H3BTG2 121 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 P01737 135 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 MGPP08493 103 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 CXCL1P09341 107 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 RPL35P42766 123 aaKnown RBP6.28□□□□□ -1.4
COPS4-207ENST00000509317 SULT1A2P50226 295 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 NKX2-5P52952 324 aaPredicted RBP6.28□□□□□ -1.4
COPS4-207ENST00000509317 CCL20P78556 96 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 TMEM97Q5BJF2 176 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 MANBALQ9NQG1 85 aa6.28□□□□□ -1.4
COPS4-207ENST00000509317 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 H7C1H1 209 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 M0QY20 66 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 OR5AL1P0C617 328 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
COPS4-207ENST00000509317 SSBP4Q9BWG4 385 aaPredicted RBP6.27□□□□□ -1.41
COPS4-207ENST00000509317 SNAI2O43623 268 aa6.26□□□□□ -1.41
COPS4-207ENST00000509317 GZMBP10144 247 aa6.26□□□□□ -1.41
COPS4-207ENST00000509317 C11orf52Q96A22 123 aa6.26□□□□□ -1.41
COPS4-207ENST00000509317 A0A1B0GUV1 79 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 SMIM17P0DL12 118 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 CENPWQ5EE01 88 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 Q6ZRP5 223 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 TCTE3Q8IZS6 198 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
COPS4-207ENST00000509317 TPPP3Q9BW30 176 aa6.25□□□□□ -1.41
COPS4-207ENST00000509317 RAB19A4D1S5 217 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 IFNA1P01562 189 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 GNG4P50150 75 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
COPS4-207ENST00000509317 MEF2BQ02080 365 aaPredicted RBP6.24□□□□□ -1.41
COPS4-207ENST00000509317 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 OR2D3Q8NGH3 330 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 MED9Q9NWA0 146 aa6.24□□□□□ -1.41
COPS4-207ENST00000509317 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
COPS4-207ENST00000509317 UBE2L6O14933 153 aa6.23□□□□□ -1.41
COPS4-207ENST00000509317 PDE6DO43924 150 aa6.23□□□□□ -1.41
COPS4-207ENST00000509317 AMTP48728 403 aa6.23□□□□□ -1.41
COPS4-207ENST00000509317 SLC51BQ86UW2 128 aa6.23□□□□□ -1.41
COPS4-207ENST00000509317 FER1L6-AS1Q8NA97 138 aa6.23□□□□□ -1.41
COPS4-207ENST00000509317 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 XKRY2A2RUG3 117 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 C19orf71A6NCJ1 209 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 BCL2P10415 239 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 CACNG7P62955 275 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 FOXI1Q12951 378 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 SMIM12Q96EX1 92 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 BIN3Q9NQY0 253 aa6.22□□□□□ -1.41
COPS4-207ENST00000509317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
COPS4-207ENST00000509317 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
COPS4-207ENST00000509317 F2Z2F3 143 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 IGLC6P0CF74 106 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 TAGLN2P37802 199 aaKnown RBP6.21□□□□□ -1.42
COPS4-207ENST00000509317 XCL1P47992 114 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 Q6ZNX1 250 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
COPS4-207ENST00000509317 TRBV20OR9-2A0A075B6H5 130 aa6.2□□□□□ -1.42
COPS4-207ENST00000509317 COTL1Q14019 142 aa6.2□□□□□ -1.42
COPS4-207ENST00000509317 PRR4Q16378 134 aa6.2□□□□□ -1.42
COPS4-207ENST00000509317 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
COPS4-207ENST00000509317 LYZL1Q6UWQ5 148 aa6.2□□□□□ -1.42
COPS4-207ENST00000509317 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
COPS4-207ENST00000509317 TRAV26-2A0A0B4J265 109 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 TRGC1P0CF51 173 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 NTF3P20783 257 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 AKAP14Q86UN6 197 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 NUDT10Q8NFP7 164 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 NUDT11Q96G61 164 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 PGLYRP4Q96LB8 373 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
COPS4-207ENST00000509317 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
COPS4-207ENST00000509317 MT-ND6P03923 174 aa6.18□□□□□ -1.42
COPS4-207ENST00000509317 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms