RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 BCL2P10415 239 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 COX6A2Q02221 97 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
CXCL1-202ENST00000509101 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
CXCL1-202ENST00000509101 IFNA1P01562 189 aa10.03□□□□□ -0.8
CXCL1-202ENST00000509101 MGPP08493 103 aa10.03□□□□□ -0.8
CXCL1-202ENST00000509101 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
CXCL1-202ENST00000509101 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
CXCL1-202ENST00000509101 SSBP4Q9BWG4 385 aaPredicted RBP10.03□□□□□ -0.8
CXCL1-202ENST00000509101 TRBV20OR9-2A0A075B6H5 130 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 GZMBP10144 247 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 LYPD6BQ8NI32 183 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 TMEM243Q9BU79 118 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 MED9Q9NWA0 146 aa10.02□□□□□ -0.81
CXCL1-202ENST00000509101 PDE6DO43924 150 aa10.01□□□□□ -0.81
CXCL1-202ENST00000509101 NDUFS6O75380 124 aaKnown RBP10.01□□□□□ -0.81
CXCL1-202ENST00000509101 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
CXCL1-202ENST00000509101 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
CXCL1-202ENST00000509101 STPG4Q8N801 248 aa10.01□□□□□ -0.81
CXCL1-202ENST00000509101 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
CXCL1-202ENST00000509101 A0A1B0GUV1 79 aa10□□□□□ -0.81
CXCL1-202ENST00000509101 M0QY20 66 aa10□□□□□ -0.81
CXCL1-202ENST00000509101 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
CXCL1-202ENST00000509101 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
CXCL1-202ENST00000509101 RPS10P46783 165 aaKnown RBP9.99□□□□□ -0.81
CXCL1-202ENST00000509101 GNG4P50150 75 aa9.99□□□□□ -0.81
CXCL1-202ENST00000509101 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
CXCL1-202ENST00000509101 REG3GQ6UW15 175 aa9.99□□□□□ -0.81
CXCL1-202ENST00000509101 LPAP08519 4548 aa9.99□□□□□ -0.81
CXCL1-202ENST00000509101 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 C19orf71A6NCJ1 209 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 H7C1H1 209 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 UBE2L6O14933 153 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 CFAP161Q6P656 301 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 TPPP3Q9BW30 176 aa9.98□□□□□ -0.81
CXCL1-202ENST00000509101 A0A096LNI7 61 aa9.97□□□□□ -0.81
CXCL1-202ENST00000509101 TAGLN2P37802 199 aaKnown RBP9.97□□□□□ -0.81
CXCL1-202ENST00000509101 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
CXCL1-202ENST00000509101 AMTP48728 403 aa9.95□□□□□ -0.82
CXCL1-202ENST00000509101 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
CXCL1-202ENST00000509101 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
CXCL1-202ENST00000509101 SMIM12Q96EX1 92 aa9.95□□□□□ -0.82
CXCL1-202ENST00000509101 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
CXCL1-202ENST00000509101 K7EN84 100 aa9.94□□□□□ -0.82
CXCL1-202ENST00000509101 OR2D3Q8NGH3 330 aa9.94□□□□□ -0.82
CXCL1-202ENST00000509101 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
CXCL1-202ENST00000509101 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 COTL1Q14019 142 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 NUDT10Q8NFP7 164 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 NUDT11Q96G61 164 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 FAM210AQ96ND0 272 aa9.93□□□□□ -0.82
CXCL1-202ENST00000509101 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
CXCL1-202ENST00000509101 CEBPGP53567 150 aa9.92□□□□□ -0.82
CXCL1-202ENST00000509101 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
CXCL1-202ENST00000509101 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
CXCL1-202ENST00000509101 RNASE7Q9H1E1 156 aaKnown RBP9.92□□□□□ -0.82
CXCL1-202ENST00000509101 NIT2Q9NQR4 276 aa9.92□□□□□ -0.82
CXCL1-202ENST00000509101 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
CXCL1-202ENST00000509101 SRP19P09132 144 aaKnown RBP9.9□□□□□ -0.82
CXCL1-202ENST00000509101 RPS20P60866 119 aaKnown RBP9.9□□□□□ -0.82
CXCL1-202ENST00000509101 CACNG7P62955 275 aa9.9□□□□□ -0.82
CXCL1-202ENST00000509101 Q6ZRP5 223 aa9.9□□□□□ -0.82
CXCL1-202ENST00000509101 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
CXCL1-202ENST00000509101 AMMECR1LQ6DCA0 310 aa9.89□□□□□ -0.83
CXCL1-202ENST00000509101 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
CXCL1-202ENST00000509101 C9JQL5 133 aa9.88□□□□□ -0.83
CXCL1-202ENST00000509101 TRGC1P0CF51 173 aa9.88□□□□□ -0.83
CXCL1-202ENST00000509101 SRSF3P84103 164 aaKnown RBP9.88□□□□□ -0.83
CXCL1-202ENST00000509101 FOXI1Q12951 378 aa9.88□□□□□ -0.83
CXCL1-202ENST00000509101 LYZL1Q6UWQ5 148 aa9.88□□□□□ -0.83
CXCL1-202ENST00000509101 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
CXCL1-202ENST00000509101 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
CXCL1-202ENST00000509101 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
CXCL1-202ENST00000509101 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
CXCL1-202ENST00000509101 RNASEKQ6P5S7 137 aaKnown RBP9.87□□□□□ -0.83
CXCL1-202ENST00000509101 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
CXCL1-202ENST00000509101 PKIGQ9Y2B9 76 aa9.87□□□□□ -0.83
CXCL1-202ENST00000509101 SMIM7Q9BQ49 75 aa9.86□□□□□ -0.83
CXCL1-202ENST00000509101 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 NTF3P20783 257 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 XCL1P47992 114 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 LINC01551Q86U37 167 aa9.85□□□□□ -0.83
CXCL1-202ENST00000509101 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
CXCL1-202ENST00000509101 F2Z2F3 143 aa9.84□□□□□ -0.83
CXCL1-202ENST00000509101 GATCO43716 136 aaKnown RBP9.84□□□□□ -0.83
CXCL1-202ENST00000509101 CTRLP40313 264 aa9.84□□□□□ -0.83
CXCL1-202ENST00000509101 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
CXCL1-202ENST00000509101 FAM231BA6NCW3 169 aa9.83□□□□□ -0.84
CXCL1-202ENST00000509101 APCSP02743 223 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms