RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 IGHV3-30P01768 117 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 PPBPP02775 128 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 IGHV3-30-5P0DP03 117 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 RPL32P62910 135 aaKnown RBP7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 COTL1Q14019 142 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
POLR2J3-213ENST00000508848 A0A087WTM6 91 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 LRCOL1A6NCL2 159 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 I3L3M4 83 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 PHOX2AO14813 284 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 HBBP68871 147 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 TMEM70Q9BUB7 260 aa7.08□□□□□ -1.28
POLR2J3-213ENST00000508848 TRAV9-1A0A075B6T8 112 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 TMEM262E9PQX1 116 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 VCYO14598 125 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 TCAPO15273 167 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 MIAQ16674 131 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 ST20Q9HBF5 79 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 KLK12Q9UKR0 248 aa7.07□□□□□ -1.28
POLR2J3-213ENST00000508848 TRAV8-4A0A0B4J246 113 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 TRAV26-2A0A0B4J265 109 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 ESDP10768 282 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 RBX1P62877 108 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 NRACQ8N912 160 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 NTN5Q8WTR8 489 aaPredicted RBP7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 CARHSP1Q9Y2V2 147 aaKnown RBP7.06□□□□□ -1.28
POLR2J3-213ENST00000508848 PSCAO43653 123 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 ADCYAP1P18509 176 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 PMCHP20382 165 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 AMTP48728 403 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 CAMPP49913 170 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 MRPL51Q4U2R6 128 aaKnown RBP7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 Q8N3U1 123 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
POLR2J3-213ENST00000508848 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
POLR2J3-213ENST00000508848 MRPL52Q86TS9 123 aaKnown RBP7.04□□□□□ -1.28
POLR2J3-213ENST00000508848 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
POLR2J3-213ENST00000508848 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 APCSP02743 223 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 ANGP03950 147 aaKnown RBP7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 CKS2P33552 79 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 RPS10P46783 165 aaKnown RBP7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 RHEBQ15382 184 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 SPATA12Q7Z6I5 190 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 Q8N976 141 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 C20orf203Q8NBC4 194 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 UBE2WQ96B02 151 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 KIR2DL4Q99706 377 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 Q9HAA7 133 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
POLR2J3-213ENST00000508848 UBE2L6O14933 153 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 GAS8-AS1O95177 125 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 TSHBP01222 138 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 CRPP02741 224 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 GAGE6Q13070 117 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 COX19Q49B96 90 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 MRPL54Q6P161 138 aaKnown RBP7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 MAPKAPK5-AS1Q8N8E1 139 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
POLR2J3-213ENST00000508848 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 K7EMI3 77 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 CCL25O15444 150 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 TNFRSF6BO95407 300 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 REG3AQ06141 175 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 NDUFA5Q16718 116 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 C14orf177Q52M58 125 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 TMEM136Q6ZRR5 245 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 ORMDL3Q8N138 153 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 Q8N814 137 aa7.01□□□□□ -1.29
POLR2J3-213ENST00000508848 IGLV4-60A0A075B6I1 120 aa7□□□□□ -1.29
POLR2J3-213ENST00000508848 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
POLR2J3-213ENST00000508848 C7orf77A4D0Y5 90 aa7□□□□□ -1.29
POLR2J3-213ENST00000508848 CLRN3Q8NCR9 226 aa7□□□□□ -1.29
POLR2J3-213ENST00000508848 TMEM18Q96B42 140 aa7□□□□□ -1.29
POLR2J3-213ENST00000508848 D6R8Y8 96 aa6.99□□□□□ -1.29
POLR2J3-213ENST00000508848 FGF6P10767 208 aa6.99□□□□□ -1.29
POLR2J3-213ENST00000508848 S100PP25815 95 aa6.99□□□□□ -1.29
POLR2J3-213ENST00000508848 SMIM2Q9BVW6 85 aa6.99□□□□□ -1.29
POLR2J3-213ENST00000508848 GNB1LQ9BYB4 327 aa6.99□□□□□ -1.29
POLR2J3-213ENST00000508848 SMKR1H3BMG3 65 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms