RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 WDR87Q6ZQQ6 2873 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 DNAH7Q8WXX0 4024 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 LPAP08519 4548 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 CSMD1Q96PZ7 3565 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 FAM236AA0A1B0GUQ0 79 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 FAM236BA0A1B0GV22 79 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 A6NIN4 97 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 IFNA17P01571 189 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 GCHFRP30047 84 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 RBM3P98179 157 aaKnown RBP-0.15□□□□□ -2.43
GYPB-210ENST00000508841 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 KRTAP19-7Q3SYF9 63 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 MIC13Q5XKP0 118 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 RPL7L1Q6DKI1 246 aaKnown RBP-0.15□□□□□ -2.43
GYPB-210ENST00000508841 LZICQ8WZA0 190 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 LINC00846Q9NV44 126 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 LRRK2Q5S007 2527 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 UNC80Q8N2C7 3258 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 DCHS1Q96JQ0 3298 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 KDM5AP29375 1690 aaKnown RBP-0.15□□□□□ -2.43
GYPB-210ENST00000508841 NBEAQ8NFP9 2946 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 NBPF19A0A087WUL8 3843 aa-0.15□□□□□ -2.43
GYPB-210ENST00000508841 NIPBLQ6KC79 2804 aaeCLIP-0.15□□□□□ -2.43
GYPB-210ENST00000508841 LAMA1P25391 3075 aa-0.16□□□□□ -2.43
GYPB-210ENST00000508841 MUC22E2RYF6 1773 aaPredicted RBP-0.16□□□□□ -2.43
GYPB-210ENST00000508841 FLGP20930 4061 aaPredicted RBP-0.16□□□□□ -2.43
GYPB-210ENST00000508841 M0R2Z0 102 aa-0.16□□□□□ -2.44
GYPB-210ENST00000508841 SMIM3Q9BZL3 60 aa-0.16□□□□□ -2.44
GYPB-210ENST00000508841 TGP01266 2768 aa-0.16□□□□□ -2.44
GYPB-210ENST00000508841 MYO9AB2RTY4 2548 aa-0.16□□□□□ -2.44
GYPB-210ENST00000508841 DSPP15924 2871 aaKnown RBP-0.16□□□□□ -2.44
GYPB-210ENST00000508841 CUBNO60494 3623 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 TLN1Q9Y490 2541 aaKnown RBP-0.17□□□□□ -2.44
GYPB-210ENST00000508841 TRGV1A0A0A0MS02 117 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 SMR3BP02814 79 aaPredicted RBP-0.17□□□□□ -2.44
GYPB-210ENST00000508841 DAPK1P53355 1430 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 PSMG3Q9BT73 122 aaPredicted RBP-0.17□□□□□ -2.44
GYPB-210ENST00000508841 DNAH5Q8TE73 4624 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 SPEGQ15772 3267 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 CNOT1A5YKK6 2376 aaKnown RBP-0.17□□□□□ -2.44
GYPB-210ENST00000508841 TEX15Q9BXT5 2789 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 ARFGEF1Q9Y6D6 1849 aa-0.17□□□□□ -2.44
GYPB-210ENST00000508841 FLNBO75369 2602 aaKnown RBP-0.17□□□□□ -2.44
GYPB-210ENST00000508841 ARHGEF10O15013 1369 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 PRRC2CQ9Y520 2896 aaKnown RBP-0.18□□□□□ -2.44
GYPB-210ENST00000508841 ADGRB1O14514 1584 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 DNAH12Q6ZR08 3092 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 APOBP04114 4563 aaKnown RBP-0.18□□□□□ -2.44
GYPB-210ENST00000508841 TACC2O95359 2948 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 CSMD2Q7Z408 3487 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 EDDM3BP56851 147 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 SCIMPQ6UWF3 145 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 EYSQ5T1H1 3165 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.18□□□□□ -2.44
GYPB-210ENST00000508841 CFAP46Q8IYW2 2715 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 SPTBN2O15020 2390 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 CSMD3Q7Z407 3707 aa-0.18□□□□□ -2.44
GYPB-210ENST00000508841 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
GYPB-210ENST00000508841 TMEM2Q9UHN6 1383 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 PRG4Q92954 1404 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-210ENST00000508841 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 SPTA1P02549 2419 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 CEP250Q9BV73 2442 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 ANK3Q12955 4377 aaKnown RBP-0.19□□□□□ -2.44
GYPB-210ENST00000508841 CEP295Q9C0D2 2601 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 LINC00694P0DN24 101 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 PIPP12273 146 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-210ENST00000508841 GCN1Q92616 2671 aaKnown RBP-0.19□□□□□ -2.44
GYPB-210ENST00000508841 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 VCANP13611 3396 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 A0A0C4DFX4 3053 aa-0.19□□□□□ -2.44
GYPB-210ENST00000508841 CHD6Q8TD26 2715 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 CSPG4Q6UVK1 2322 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 SZT2Q5T011 3432 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 SIPA1L3O60292 1781 aaPredicted RBP-0.2□□□□□ -2.44
GYPB-210ENST00000508841 APC2O95996 2303 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 NF1P21359 2839 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
GYPB-210ENST00000508841 RELNP78509 3460 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 SACSQ9NZJ4 4579 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 MTORP42345 2549 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 ARPC5O15511 151 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 RRAS2P62070 204 aaPredicted RBP-0.21□□□□□ -2.44
GYPB-210ENST00000508841 Q6ZUT4 128 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 UBE2DNLQ8IWF7 75 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 MKI67P46013 3256 aaKnown RBP-0.21□□□□□ -2.44
GYPB-210ENST00000508841 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 CHD9Q3L8U1 2897 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 PRKDCP78527 4128 aaKnown RBP-0.21□□□□□ -2.44
GYPB-210ENST00000508841 IBTKQ9P2D0 1353 aaPredicted RBP-0.21□□□□□ -2.44
GYPB-210ENST00000508841 ACACAQ13085 2346 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 PCNTO95613 3336 aa-0.21□□□□□ -2.44
GYPB-210ENST00000508841 DMXL2Q8TDJ6 3036 aa-0.22□□□□□ -2.44
GYPB-210ENST00000508841 M0R129 80 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms