RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 GAS8-AS1O95177 125 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 CACNG7P62955 275 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 COTL1Q14019 142 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 TMUB2Q71RG4 321 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 CYTL1Q9NRR1 136 aa11.22□□□□□ -0.61
CLDND1-217ENST00000508071 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
CLDND1-217ENST00000508071 A0A096LNI7 61 aa11.2□□□□□ -0.62
CLDND1-217ENST00000508071 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
CLDND1-217ENST00000508071 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
CLDND1-217ENST00000508071 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
CLDND1-217ENST00000508071 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-217ENST00000508071 TRGC1P0CF51 173 aa11.19□□□□□ -0.62
CLDND1-217ENST00000508071 RPL35P42766 123 aaKnown RBP11.19□□□□□ -0.62
CLDND1-217ENST00000508071 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
CLDND1-217ENST00000508071 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
CLDND1-217ENST00000508071 MBD3L1Q8WWY6 194 aa11.19□□□□□ -0.62
CLDND1-217ENST00000508071 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
CLDND1-217ENST00000508071 ARPC5O15511 151 aa11.18□□□□□ -0.62
CLDND1-217ENST00000508071 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
CLDND1-217ENST00000508071 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
CLDND1-217ENST00000508071 F2Z2F3 143 aa11.17□□□□□ -0.62
CLDND1-217ENST00000508071 Q6ZRP5 223 aa11.17□□□□□ -0.62
CLDND1-217ENST00000508071 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
CLDND1-217ENST00000508071 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
CLDND1-217ENST00000508071 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLDND1-217ENST00000508071 LPAP08519 4548 aa11.15□□□□□ -0.62
CLDND1-217ENST00000508071 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.62
CLDND1-217ENST00000508071 G3V3Q6 166 aa11.14□□□□□ -0.63
CLDND1-217ENST00000508071 NTF3P20783 257 aa11.14□□□□□ -0.63
CLDND1-217ENST00000508071 FOXI1Q12951 378 aa11.14□□□□□ -0.63
CLDND1-217ENST00000508071 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
CLDND1-217ENST00000508071 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
CLDND1-217ENST00000508071 C19orf71A6NCJ1 209 aa11.13□□□□□ -0.63
CLDND1-217ENST00000508071 IFNA1P01562 189 aa11.13□□□□□ -0.63
CLDND1-217ENST00000508071 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
CLDND1-217ENST00000508071 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
CLDND1-217ENST00000508071 CARD19Q96LW7 228 aa11.12□□□□□ -0.63
CLDND1-217ENST00000508071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-217ENST00000508071 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-217ENST00000508071 H7C423 109 aa11.11□□□□□ -0.63
CLDND1-217ENST00000508071 NCR2O95944 276 aa11.11□□□□□ -0.63
CLDND1-217ENST00000508071 XCL1P47992 114 aa11.11□□□□□ -0.63
CLDND1-217ENST00000508071 Q6ZNX1 250 aa11.11□□□□□ -0.63
CLDND1-217ENST00000508071 LINC00526Q96FQ7 95 aa11.11□□□□□ -0.63
CLDND1-217ENST00000508071 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
CLDND1-217ENST00000508071 APCSP02743 223 aa11.1□□□□□ -0.63
CLDND1-217ENST00000508071 FGF6P10767 208 aa11.1□□□□□ -0.63
CLDND1-217ENST00000508071 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
CLDND1-217ENST00000508071 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
CLDND1-217ENST00000508071 TRAV26-2A0A0B4J265 109 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 GNG4P50150 75 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 TWIST1Q15672 202 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 SMIM12Q96EX1 92 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
CLDND1-217ENST00000508071 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
CLDND1-217ENST00000508071 CCL20P78556 96 aa11.08□□□□□ -0.64
CLDND1-217ENST00000508071 C9orf62Q8N4C0 152 aa11.08□□□□□ -0.64
CLDND1-217ENST00000508071 BIN3Q9NQY0 253 aa11.08□□□□□ -0.64
CLDND1-217ENST00000508071 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 CCL25O15444 150 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
CLDND1-217ENST00000508071 CTRLP40313 264 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 ZNF345Q14585 488 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 RPL39LQ96EH5 51 aaKnown RBP11.07□□□□□ -0.64
CLDND1-217ENST00000508071 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
CLDND1-217ENST00000508071 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
CLDND1-217ENST00000508071 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
CLDND1-217ENST00000508071 SMLR1H3BR10 107 aa11.05□□□□□ -0.64
CLDND1-217ENST00000508071 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
CLDND1-217ENST00000508071 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 SS18Q15532 418 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 ISOC2Q96AB3 205 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
CLDND1-217ENST00000508071 KANTRA0A1W2PQU2 76 aa11.03□□□□□ -0.64
CLDND1-217ENST00000508071 MT-ND6P03923 174 aa11.03□□□□□ -0.64
CLDND1-217ENST00000508071 CAMPP49913 170 aa11.03□□□□□ -0.64
CLDND1-217ENST00000508071 TEX261Q6UWH6 196 aa11.03□□□□□ -0.64
CLDND1-217ENST00000508071 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
CLDND1-217ENST00000508071 I3L3M4 83 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 BCL2L11O43521 198 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 PMCHP20382 165 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 EIF5AP63241 154 aaKnown RBP11.02□□□□□ -0.65
CLDND1-217ENST00000508071 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
CLDND1-217ENST00000508071 TRBV20OR9-2A0A075B6H5 130 aa11.01□□□□□ -0.65
CLDND1-217ENST00000508071 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
CLDND1-217ENST00000508071 PDE6DO43924 150 aa11.01□□□□□ -0.65
CLDND1-217ENST00000508071 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
CLDND1-217ENST00000508071 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
CLDND1-217ENST00000508071 TEX46H3BTG2 121 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms