RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
CLDND1-216ENST00000507944 RPP21Q9H633 154 aaKnown RBP13.44□□□□□ -0.26
CLDND1-216ENST00000507944 CNFNQ9BYD5 112 aa13.43□□□□□ -0.26
CLDND1-216ENST00000507944 GFRA4Q9GZZ7 299 aa13.43□□□□□ -0.26
CLDND1-216ENST00000507944 K7EN84 100 aa13.42□□□□□ -0.26
CLDND1-216ENST00000507944 COTL1Q14019 142 aa13.42□□□□□ -0.26
CLDND1-216ENST00000507944 UBE2L6O14933 153 aa13.41□□□□□ -0.26
CLDND1-216ENST00000507944 AMTP48728 403 aa13.41□□□□□ -0.26
CLDND1-216ENST00000507944 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
CLDND1-216ENST00000507944 SDIM1Q6ZPB5 146 aa13.4□□□□□ -0.26
CLDND1-216ENST00000507944 TRAV26-2A0A0B4J265 109 aa13.39□□□□□ -0.27
CLDND1-216ENST00000507944 hDV102S1A0JD36 115 aa13.38□□□□□ -0.27
CLDND1-216ENST00000507944 Q6ZNX1 250 aa13.38□□□□□ -0.27
CLDND1-216ENST00000507944 GTSF1Q8WW33 167 aa13.38□□□□□ -0.27
CLDND1-216ENST00000507944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-216ENST00000507944 LRP1Q07954 4544 aaKnown RBP13.38□□□□□ -0.27
CLDND1-216ENST00000507944 RPL37AP61513 92 aaKnown RBP13.37□□□□□ -0.27
CLDND1-216ENST00000507944 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
CLDND1-216ENST00000507944 BLOC1S1P78537 153 aa13.37□□□□□ -0.27
CLDND1-216ENST00000507944 SMIM15Q7Z3B0 74 aa13.37□□□□□ -0.27
CLDND1-216ENST00000507944 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
CLDND1-216ENST00000507944 PANO1I0J062 215 aa13.36□□□□□ -0.27
CLDND1-216ENST00000507944 ALKAL2Q6UX46 152 aa13.36□□□□□ -0.27
CLDND1-216ENST00000507944 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
CLDND1-216ENST00000507944 GATCO43716 136 aaKnown RBP13.35□□□□□ -0.27
CLDND1-216ENST00000507944 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
CLDND1-216ENST00000507944 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
CLDND1-216ENST00000507944 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
CLDND1-216ENST00000507944 OXTP01178 125 aa13.34□□□□□ -0.27
CLDND1-216ENST00000507944 A8MWL6 223 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 NCR2O95944 276 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 SLPIP03973 132 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 TEX261Q6UWH6 196 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 FAM231DQ6ZW35 169 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.28
CLDND1-216ENST00000507944 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-216ENST00000507944 IGKV3OR2-268A0A0C4DH90 116 aa13.32□□□□□ -0.28
CLDND1-216ENST00000507944 GAGE12HA6NDE8 117 aa13.32□□□□□ -0.28
CLDND1-216ENST00000507944 AMMECR1LQ6DCA0 310 aa13.32□□□□□ -0.28
CLDND1-216ENST00000507944 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
CLDND1-216ENST00000507944 FAT3Q8TDW7 4589 aa13.31□□□□□ -0.28
CLDND1-216ENST00000507944 IGHV3-64A0A075B6Q5 118 aa13.31□□□□□ -0.28
CLDND1-216ENST00000507944 CEBPGP53567 150 aa13.31□□□□□ -0.28
CLDND1-216ENST00000507944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-216ENST00000507944 IGKV2-29A2NJV5 120 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-216ENST00000507944 SDHAF1A6NFY7 115 aa13.3□□□□□ -0.28
CLDND1-216ENST00000507944 H7C423 109 aa13.3□□□□□ -0.28
CLDND1-216ENST00000507944 APCSP02743 223 aa13.3□□□□□ -0.28
CLDND1-216ENST00000507944 CIRBPQ14011 172 aaKnown RBP13.3□□□□□ -0.28
CLDND1-216ENST00000507944 RNASEKQ6P5S7 137 aaKnown RBP13.3□□□□□ -0.28
CLDND1-216ENST00000507944 CFAP161Q6P656 301 aa13.3□□□□□ -0.28
CLDND1-216ENST00000507944 DPH3Q96FX2 82 aa13.3□□□□□ -0.28
CLDND1-216ENST00000507944 hCG_2014768A0A024R1R8 64 aa13.29□□□□□ -0.28
CLDND1-216ENST00000507944 CT83Q5H943 113 aa13.29□□□□□ -0.28
CLDND1-216ENST00000507944 FGF6P10767 208 aa13.28□□□□□ -0.28
CLDND1-216ENST00000507944 PMCHP20382 165 aa13.28□□□□□ -0.28
CLDND1-216ENST00000507944 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
CLDND1-216ENST00000507944 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
CLDND1-216ENST00000507944 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-216ENST00000507944 I3L3M4 83 aa13.27□□□□□ -0.29
CLDND1-216ENST00000507944 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
CLDND1-216ENST00000507944 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
CLDND1-216ENST00000507944 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
CLDND1-216ENST00000507944 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
CLDND1-216ENST00000507944 SERTAD4-AS1Q5TG53 156 aa13.26□□□□□ -0.29
CLDND1-216ENST00000507944 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
CLDND1-216ENST00000507944 A0A087WYN8 130 aa13.25□□□□□ -0.29
CLDND1-216ENST00000507944 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
CLDND1-216ENST00000507944 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
CLDND1-216ENST00000507944 GAS8-AS1O95177 125 aa13.24□□□□□ -0.29
CLDND1-216ENST00000507944 ZNF25P17030 456 aaPredicted RBP13.24□□□□□ -0.29
CLDND1-216ENST00000507944 RPS10P46783 165 aaKnown RBP13.24□□□□□ -0.29
CLDND1-216ENST00000507944 HIGD2BQ4VC39 106 aa13.24□□□□□ -0.29
CLDND1-216ENST00000507944 LINC01551Q86U37 167 aa13.24□□□□□ -0.29
CLDND1-216ENST00000507944 TSKUQ8WUA8 353 aa13.24□□□□□ -0.29
CLDND1-216ENST00000507944 ST20Q9HBF5 79 aa13.24□□□□□ -0.29
CLDND1-216ENST00000507944 A0A1B0GUT8 65 aa13.23□□□□□ -0.29
CLDND1-216ENST00000507944 HIGD1CA8MV81 97 aa13.23□□□□□ -0.29
CLDND1-216ENST00000507944 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
CLDND1-216ENST00000507944 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
CLDND1-216ENST00000507944 BTF3L4Q96K17 158 aa13.23□□□□□ -0.29
CLDND1-216ENST00000507944 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
CLDND1-216ENST00000507944 ZNF727A8MUV8 499 aa13.22□□□□□ -0.29
CLDND1-216ENST00000507944 OR5A1Q8NGJ0 315 aa13.22□□□□□ -0.29
CLDND1-216ENST00000507944 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
CLDND1-216ENST00000507944 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
CLDND1-216ENST00000507944 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
CLDND1-216ENST00000507944 TSHBP01222 138 aa13.21□□□□□ -0.29
CLDND1-216ENST00000507944 ESDP10768 282 aa13.21□□□□□ -0.29
CLDND1-216ENST00000507944 COX6A2Q02221 97 aa13.21□□□□□ -0.29
CLDND1-216ENST00000507944 TMEM242Q9NWH2 141 aa13.21□□□□□ -0.29
CLDND1-216ENST00000507944 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-216ENST00000507944 SRP19P09132 144 aaKnown RBP13.2□□□□□ -0.3
CLDND1-216ENST00000507944 RAB4AP20338 218 aa13.2□□□□□ -0.3
CLDND1-216ENST00000507944 POLR2KP53803 58 aaKnown RBP13.2□□□□□ -0.3
CLDND1-216ENST00000507944 FOXI1Q12951 378 aa13.2□□□□□ -0.3
CLDND1-216ENST00000507944 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
CLDND1-216ENST00000507944 XCL1P47992 114 aa13.19□□□□□ -0.3
CLDND1-216ENST00000507944 PRSS3P2Q8NHM4 247 aa13.19□□□□□ -0.3
CLDND1-216ENST00000507944 MRAP2Q96G30 205 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms