RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KRBOX1C9JBD0 128 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 XCL1P47992 114 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 DEFA3P59666 94 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 SSTP61278 116 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 FOXI1Q12951 378 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 SAPCD1Q5SSQ6 148 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 STX12Q86Y82 276 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 TMEM252Q8N6L7 170 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
VCAN-207ENST00000507162 FUNDC2Q9BWH2 189 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 SERTM2A0A1B0GWG4 89 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 FAM168BA1KXE4 195 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 H3BMQ9 156 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 TCRAP04437 139 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 PVALBP20472 110 aaPredicted RBP4.13□□□□□ -1.75
VCAN-207ENST00000507162 RPL12P30050 165 aaKnown RBP4.13□□□□□ -1.75
VCAN-207ENST00000507162 CAMPP49913 170 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 DNLZQ5SXM8 178 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 PET117Q6UWS5 81 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 FAM19A5Q7Z5A7 132 aaPredicted RBP4.13□□□□□ -1.75
VCAN-207ENST00000507162 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 OR5C1Q8NGR4 320 aa4.13□□□□□ -1.75
VCAN-207ENST00000507162 IGLV4-69A0A075B6H9 119 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 TRAV34A0A0B4J273 112 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 MUC21A0A140T8X8 626 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.12□□□□□ -1.75
VCAN-207ENST00000507162 ZNF861PO60384 105 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 APOMO95445 188 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 TMBIM6P55061 237 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 MEF2BQ02080 365 aaPredicted RBP4.12□□□□□ -1.75
VCAN-207ENST00000507162 AMMECR1LQ6DCA0 310 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 TOMM5Q8N4H5 51 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 OR5A1Q8NGJ0 315 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 CAMK2N2Q96S95 79 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 MRPS26Q9BYN8 205 aaKnown RBP4.12□□□□□ -1.75
VCAN-207ENST00000507162 VCX3AQ9NNX9 186 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 RSL24D1Q9UHA3 163 aaKnown RBP4.12□□□□□ -1.75
VCAN-207ENST00000507162 FLVCR2Q9UPI3 526 aa4.12□□□□□ -1.75
VCAN-207ENST00000507162 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
VCAN-207ENST00000507162 C17orf112F2Z3M2 114 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 PRYO14603 147 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
VCAN-207ENST00000507162 CCL25O15444 150 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 NKX2-5P52952 324 aaPredicted RBP4.11□□□□□ -1.75
VCAN-207ENST00000507162 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 CST9LP1Q5W188 147 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 RNASEKQ6P5S7 137 aaKnown RBP4.11□□□□□ -1.75
VCAN-207ENST00000507162 NUP35Q8NFH5 326 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 ZNF471Q9BX82 626 aaPredicted RBP4.11□□□□□ -1.75
VCAN-207ENST00000507162 Q9H521 79 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 KCNIP2Q9NS61 270 aa4.11□□□□□ -1.75
VCAN-207ENST00000507162 SH2D1AO60880 128 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 CRIP1P50238 77 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 AP3S2P59780 193 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 LRRC37A5PQ49AS3 106 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 C5orf17Q8NAS9 161 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 C11orf1Q9H5F2 150 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 EPDR1Q9UM22 224 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 ARL2-SNX15V9GYD0 113 aa4.1□□□□□ -1.75
VCAN-207ENST00000507162 A0A1W2PPV4 95 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 MGPP08493 103 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 OR10AG1Q8NH19 301 aa4.09□□□□□ -1.75
VCAN-207ENST00000507162 WDR61Q9GZS3 305 aaKnown RBP4.09□□□□□ -1.75
VCAN-207ENST00000507162 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 M0QXV9 152 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 COTL1Q14019 142 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 SS18Q15532 418 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 PYDC2Q56P42 97 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 SPANXN1Q5VSR9 72 aa4.08□□□□□ -1.76
VCAN-207ENST00000507162 A0A087WXM4 84 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 A4D1N5 150 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 M0QY20 66 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 BCL2L11O43521 198 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 GAGE2EQ4V326 116 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 GAGE2DQ9UEU5 116 aa4.07□□□□□ -1.76
VCAN-207ENST00000507162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.06□□□□□ -1.76
VCAN-207ENST00000507162 A0A1B0GVG6 124 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 IGKV2-29A2NJV5 120 aaPredicted RBP4.06□□□□□ -1.76
VCAN-207ENST00000507162 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
VCAN-207ENST00000507162 NDUFB6O95139 128 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 ARL14EPLP0DKL9 152 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 LINC00310P59036 64 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 CD164L2Q6UWJ8 174 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
VCAN-207ENST00000507162 SCGB1C1Q8TD33 95 aa4.06□□□□□ -1.76
VCAN-207ENST00000507162 IGKV2D-26A0A0A0MRZ7 120 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 NPSP0C0P6 89 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 PGLYRP4Q96LB8 373 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 IMMP2LQ96T52 175 aa4.05□□□□□ -1.76
VCAN-207ENST00000507162 WFDC1Q9HC57 220 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms