RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
SGCA-204ENST00000504073 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
SGCA-204ENST00000504073 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
SGCA-204ENST00000504073 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
SGCA-204ENST00000504073 BTF3P20290 206 aaKnown RBP10.59□□□□□ -0.71
SGCA-204ENST00000504073 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
SGCA-204ENST00000504073 PHLDA1Q8WV24 401 aaPredicted RBP10.59□□□□□ -0.71
SGCA-204ENST00000504073 CYSLTR1Q9Y271 337 aa10.59□□□□□ -0.71
SGCA-204ENST00000504073 DYNC2H1Q8NCM8 4307 aaKnown RBP10.58□□□□□ -0.72
SGCA-204ENST00000504073 A0A0J9YY99 117 aa10.58□□□□□ -0.72
SGCA-204ENST00000504073 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
SGCA-204ENST00000504073 NEGR1Q7Z3B1 354 aa10.58□□□□□ -0.72
SGCA-204ENST00000504073 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
SGCA-204ENST00000504073 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
SGCA-204ENST00000504073 RYR2Q92736 4967 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 TRBV25-1A0A075B6N4 114 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 ATP5LO75964 103 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 URB1-AS1Q96HZ7 61 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
SGCA-204ENST00000504073 UBE2L6O14933 153 aa10.56□□□□□ -0.72
SGCA-204ENST00000504073 FABP4P15090 132 aa10.56□□□□□ -0.72
SGCA-204ENST00000504073 PKIAP61925 76 aa10.56□□□□□ -0.72
SGCA-204ENST00000504073 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
SGCA-204ENST00000504073 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
SGCA-204ENST00000504073 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 TSHBP01222 138 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 LINC00310P59036 64 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
SGCA-204ENST00000504073 H7C423 109 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 NUPR1O60356 82 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
SGCA-204ENST00000504073 AKR1D1P51857 326 aa10.53□□□□□ -0.72
SGCA-204ENST00000504073 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
SGCA-204ENST00000504073 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
SGCA-204ENST00000504073 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
SGCA-204ENST00000504073 SCGB3A1Q96QR1 104 aa10.53□□□□□ -0.72
SGCA-204ENST00000504073 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
SGCA-204ENST00000504073 NUPR2A6NF83 97 aa10.52□□□□□ -0.73
SGCA-204ENST00000504073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.52□□□□□ -0.73
SGCA-204ENST00000504073 Q6ZN92 141 aa10.52□□□□□ -0.73
SGCA-204ENST00000504073 TMEM141Q96I45 108 aa10.52□□□□□ -0.73
SGCA-204ENST00000504073 Q9UF83 564 aa10.52□□□□□ -0.73
SGCA-204ENST00000504073 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
SGCA-204ENST00000504073 C20orf202A1L168 122 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 NPSP0C0P6 89 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 TIRAPP58753 221 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 ERASQ7Z444 233 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
SGCA-204ENST00000504073 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 A0A096LPF7 62 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 TRAV8-6A0A0B4J262 113 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 OR10D4PQ8NGN7 298 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
SGCA-204ENST00000504073 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
SGCA-204ENST00000504073 TCTAP57738 103 aa10.49□□□□□ -0.73
SGCA-204ENST00000504073 KRTDAPP60985 99 aa10.49□□□□□ -0.73
SGCA-204ENST00000504073 LELP1Q5T871 98 aa10.49□□□□□ -0.73
SGCA-204ENST00000504073 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
SGCA-204ENST00000504073 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
SGCA-204ENST00000504073 IGLL5B9A064 214 aa10.48□□□□□ -0.73
SGCA-204ENST00000504073 PRSS1P07477 247 aa10.48□□□□□ -0.73
SGCA-204ENST00000504073 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
SGCA-204ENST00000504073 A0A096LNJ9 63 aa10.47□□□□□ -0.73
SGCA-204ENST00000504073 PET117Q6UWS5 81 aa10.47□□□□□ -0.73
SGCA-204ENST00000504073 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
SGCA-204ENST00000504073 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
SGCA-204ENST00000504073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.73
SGCA-204ENST00000504073 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.73
SGCA-204ENST00000504073 TMEM262E9PQX1 116 aa10.46□□□□□ -0.73
SGCA-204ENST00000504073 CCL18P55774 89 aa10.46□□□□□ -0.73
SGCA-204ENST00000504073 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.73
SGCA-204ENST00000504073 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
SGCA-204ENST00000504073 OR5A1Q8NGJ0 315 aa10.46□□□□□ -0.73
SGCA-204ENST00000504073 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.73
SGCA-204ENST00000504073 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
SGCA-204ENST00000504073 IFITM10A6NMD0 228 aa10.45□□□□□ -0.74
SGCA-204ENST00000504073 FGF6P10767 208 aa10.45□□□□□ -0.74
SGCA-204ENST00000504073 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
SGCA-204ENST00000504073 LYPD5Q6UWN5 251 aa10.45□□□□□ -0.74
SGCA-204ENST00000504073 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
SGCA-204ENST00000504073 C2orf88Q9BSF0 95 aa10.45□□□□□ -0.74
SGCA-204ENST00000504073 VCX2Q9H322 139 aa10.45□□□□□ -0.74
SGCA-204ENST00000504073 A0A087WX48 190 aa10.44□□□□□ -0.74
SGCA-204ENST00000504073 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
SGCA-204ENST00000504073 SYS1-DBNDD2H3BUS1 97 aa10.44□□□□□ -0.74
SGCA-204ENST00000504073 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
SGCA-204ENST00000504073 GAGE6Q13070 117 aa10.44□□□□□ -0.74
SGCA-204ENST00000504073 UBE2D4Q9Y2X8 147 aa10.44□□□□□ -0.74
SGCA-204ENST00000504073 IGIPA6NJ69 53 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms